RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CPXCR1Q8N123 301 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 PPM1KQ8N3J5 372 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 TRIML2Q8N7C3 387 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 DEPTORQ8TB45 409 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 NEK9Q8TD19 979 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CEP295NLQ96MC4 621 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CSRNP1Q96S65 589 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SPATA16Q9BXB7 569 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 C1orf112Q9NSG2 853 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 NDE1Q9NXR1 346 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 LRRC42Q9Y546 428 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 RGPD8O14715 1765 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 LRRC37A3O60309 1634 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 MRC1P22897 1456 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 POTEB3A0JP26 581 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 FAM170AA1A519 330 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ARHGAP42A6NI28 874 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 POTECB2RU33 542 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L18D6R9N7 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L22D6RA61 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L17D6RBQ6 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L19D6RCP7 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L20D6RJB6 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SLC16A3O15427 465 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SHBGP04278 402 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 AKR1B1P15121 316 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 HOXD11P31277 338 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 RHBDL3P58872 404 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L24Q0WX57 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CENPPQ6IPU0 288 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 POTEBQ6S5H4 581 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ADGRA1Q86SQ6 560 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CDAN1Q8IWY9 1227 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 GIPC3Q8TF64 312 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 FMO2Q99518 471 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ZBED2Q9BTP6 218 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 HOMER2Q9NSB8 354 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SPEF2Q9C093 1822 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SPATA31A5Q5VU36 1347 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SPATA31A7Q8IWB4 1347 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ENTPD5O75356 428 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 DCTN3O75935 186 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ASMTLO95671 621 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ATP6V1B1P15313 513 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 BMP6P22004 513 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CRKP46108 304 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 PLTPP55058 493 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 LMNB2Q03252 620 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 DMP1Q13316 513 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 GRAMD1BQ3KR37 738 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 NSMFQ6X4W1 530 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 B3GNT6Q6ZMB0 384 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 DDX42Q86XP3 938 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SCAIQ8N9R8 606 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 LINC00116Q8NCU8 138 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CASKIN2Q8WXE0 1202 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 PPP2R3CQ969Q6 453 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SLC39A3Q9BRY0 314 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 DNAJC17Q9NVM6 304 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 INTS13Q9NVM9 706 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 NMRK1Q9NWW6 199 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 N6AMT1Q9Y5N5 214 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 GPC6Q9Y625 555 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ABCC6O95255 1503 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 EYA4O95677 639 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 PRELPP51888 382 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 C1QTNF8P60827 252 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 DR1Q01658 176 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 PTK2Q05397 1052 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 FAM102BQ5T8I3 360 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 SDR16C5Q8N3Y7 309 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 GADD45GIP1Q8TAE8 222 aaPredicted RBP6□□□□□ -1.45
SCARB2-218ENST00000639715 RSPH1Q8WYR4 309 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 SKA1Q96BD8 255 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 MAK16Q9BXY0 300 aaKnown RBP6□□□□□ -1.45
SCARB2-218ENST00000639715 OCEL1Q9H607 264 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 NYAP2Q9P242 653 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 PNMA3Q9UL41 463 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 SYNPO2Q9UMS6 1093 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 DAGLAQ9Y4D2 1042 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 TTLL13PA6NNM8 815 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 EIF3FO00303 357 aaPredicted RBP6□□□□□ -1.45
SCARB2-218ENST00000639715 MATN2O00339 956 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 CBFA2T3O75081 653 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 NAT2P11245 290 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 TNNI1P19237 187 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 HALP42357 657 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 MXI1P50539 228 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 MAP3K7CLP57077 242 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 NAA20P61599 178 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 YWHAEP62258 255 aaKnown RBP6□□□□□ -1.45
SCARB2-218ENST00000639715 TUBA1BP68363 451 aa6□□□□□ -1.45
SCARB2-218ENST00000639715 IL9RQ01113 521 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms