RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF280BQ86YH2 543 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 FAM186BQ8IYM0 893 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 KIF12Q96FN5 646 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 NKX2-4Q9H2Z4 354 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 NRDE2Q9H7Z3 1164 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 PDE11AQ9HCR9 933 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 DERAQ9Y315 318 aa17.36■□□□□ 0.37
CLN6-216ENST00000636876 TDRD15B5MCY1 1934 aaKnown RBP17.36■□□□□ 0.37
CLN6-216ENST00000636876 SLC16A3O15427 465 aaKnown RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 B4GALT3O60512 393 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 DDHD2O94830 711 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 NFICP08651 508 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 LINC00271P0C7V0 271 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 SPAG1Q07617 926 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 TMEM132DQ14C87 1099 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 ZBTB6Q15916 424 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 ANO6Q4KMQ2 910 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 SPOUT1Q5T280 376 aaKnown RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 FILIP1Q7Z7B0 1213 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 EFCAB13Q8IY85 973 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 PLEKHO2Q8TD55 490 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 CLP1Q92989 425 aaKnown RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 SRRTQ9BXP5 876 aaKnown RBP17.35■□□□□ 0.37
CLN6-216ENST00000636876 SLC38A7Q9NVC3 462 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 C2CD2Q9Y426 696 aa17.35■□□□□ 0.37
CLN6-216ENST00000636876 XPOTO43592 962 aaKnown RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 ZC3H11AO75152 810 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLN6-216ENST00000636876 FGFR1OPO95684 399 aaKnown RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 LAG3P18627 525 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 TAP1Q03518 808 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 TUSC3Q13454 348 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 NT5DC4Q86YG4 428 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 COLGALT2Q8IYK4 626 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 TMC2Q8TDI7 906 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 BORCS6Q96GS4 357 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 FNBP1Q96RU3 617 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 GZF1Q9H116 711 aaPredicted RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 DNAJB4Q9UDY4 337 aa17.34■□□□□ 0.37
CLN6-216ENST00000636876 UBQLN1Q9UMX0 589 aaKnown RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.34■□□□□ 0.37
CLN6-216ENST00000636876 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 KRT13P13646 458 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 ENPEPQ07075 957 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 TPD52L1Q16890 204 aaPredicted RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 INTS8Q75QN2 995 aaKnown RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 DEFB123Q8N688 67 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 COLGALT1Q8NBJ5 622 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 BEST2Q8NFU1 509 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 ZNF558Q96NG5 402 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 TMEM175Q9BSA9 504 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
CLN6-216ENST00000636876 TUBGCP4Q9UGJ1 667 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 KIAA1671Q9BY89 1806 aa17.33■□□□□ 0.36
CLN6-216ENST00000636876 TRANK1O15050 2925 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 PTPRJQ12913 1337 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 CASTOR2A6NHX0 329 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 GNA14O95837 355 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 GALTP07902 379 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 CYP3A5P20815 502 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 SLC11A1P49279 550 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 VAMP7P51809 220 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 BCAR1P56945 870 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 MCCD1P59942 119 aaPredicted RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 ERVK-21P61565 698 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 BFSP1Q12934 665 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 CCDC40Q4G0X9 1142 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 LMBRD2Q68DH5 695 aaPredicted RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 SPRED2Q7Z698 418 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 WDR49Q8IV35 697 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 UROC1Q96N76 676 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 TGS1Q96RS0 853 aaKnown RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 BPIFA3Q9BQP9 254 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 SLC28A3Q9HAS3 691 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 AAASQ9NRG9 546 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 ARMCX3Q9UH62 379 aaPredicted RBP17.32■□□□□ 0.36
CLN6-216ENST00000636876 RWDD3Q9Y3V2 267 aa17.32■□□□□ 0.36
CLN6-216ENST00000636876 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
CLN6-216ENST00000636876 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
CLN6-216ENST00000636876 TNNI1P19237 187 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms