RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 LAMA3Q16787 3333 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 NFICP08651 508 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 DNAJB2P25686 324 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 PSMC2P35998 433 aaKnown RBP18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 MCCD1P59942 119 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 FAM186BQ8IYM0 893 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 FIBCD1Q8N539 461 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 C18orf25Q96B23 403 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 NKX2-4Q9H2Z4 354 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 DERAQ9Y315 318 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 C2CD2Q9Y426 696 aa18.05■□□□□ 0.48
CDC42EP4-209ENST00000630622 PTPRJQ12913 1337 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 SLC16A3O15427 465 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 EPB41P11171 864 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 TAP1Q03518 808 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 RNASELQ05823 741 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 SOX4Q06945 474 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 TMEM132DQ14C87 1099 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 SURF1Q15526 300 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 FILIP1Q7Z7B0 1213 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 COLGALT2Q8IYK4 626 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 PARD3BQ8TEW8 1205 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 SLC38A7Q9NVC3 462 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 DNAJB4Q9UDY4 337 aa18.04■□□□□ 0.48
CDC42EP4-209ENST00000630622 CLDN10P78369 228 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 ENPEPQ07075 957 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 TUSC3Q13454 348 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 C1orf220Q5T0J3 134 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 SPATA1Q5VX52 437 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 INTS8Q75QN2 995 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 SPRED2Q7Z698 418 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 NT5DC4Q86YG4 428 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 IRF2BP1Q8IU81 584 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 TMEM130Q8N3G9 435 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 CCDC127Q96BQ5 260 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 FAM84AQ96KN4 292 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 POP1Q99575 1024 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 CACNG4Q9UBN1 327 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 TUBGCP4Q9UGJ1 667 aa18.03■□□□□ 0.48
CDC42EP4-209ENST00000630622 CHD7Q9P2D1 2997 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 SOX1O00570 391 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 ZC3H11AO75152 810 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 DLATP10515 647 aaKnown RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 LAG3P18627 525 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 CYP3A5P20815 502 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 BCAR1P56945 870 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 DLG4P78352 724 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 BFSP1Q12934 665 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 WDR49Q8IV35 697 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 COLGALT1Q8NBJ5 622 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 TIFAQ96CG3 184 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 FAM193BQ96PV7 902 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 TMEM175Q9BSA9 504 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 NAT10Q9H0A0 1025 aaKnown RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 THAP9Q9H5L6 903 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 INTS13Q9NVM9 706 aa18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 UBQLN1Q9UMX0 589 aaKnown RBP18.02■□□□□ 0.48
CDC42EP4-209ENST00000630622 CASTOR2A6NHX0 329 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 LRRIQ3A6PVS8 624 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 GALTP07902 379 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 PBX3P40426 434 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 SLC11A1P49279 550 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 VAMP7P51809 220 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 GUCY2FP51841 1108 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 MARSP56192 900 aaKnown RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 ERVK-21P61565 698 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 TFAMQ00059 246 aaKnown RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 NCAPHQ15003 741 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 PPP2R2DQ66LE6 453 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 LMBRD2Q68DH5 695 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 KCNT2Q6UVM3 1135 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 FRMD5Q7Z6J6 570 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 OR5B17Q8NGF7 314 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 ZNF516Q92618 1163 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 PAAF1Q9BRP4 392 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 ARMCX3Q9UH62 379 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 NFE2L3Q9Y4A8 694 aa18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-209ENST00000630622 XPOTO43592 962 aaKnown RBP18■□□□□ 0.47
CDC42EP4-209ENST00000630622 GNA14O95837 355 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 TRIM49P0CI25 452 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 TRIM49CP0CI26 452 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 KRT13P13646 458 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 LRPAP1P30533 357 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 BMPR1AP36894 532 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 ZNF165P49910 485 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 ZNF445P59923 1031 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 MYL5Q02045 173 aa18■□□□□ 0.47
CDC42EP4-209ENST00000630622 UPP1Q16831 310 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms