RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 WDR35Q9P2L0 1181 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 CFAP69A5D8W1 941 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 STXBP3O00186 592 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 CSF1RP07333 972 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 CTSHP09668 335 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 E2F4Q16254 413 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 SYCE1LA8MT33 242 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 STK4Q13043 487 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 EIF2AQ9BY44 585 aaKnown RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 ECT2Q9H8V3 914 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 DYRK4Q9NR20 520 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 PDHBP11177 359 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 TAF1CQ15572 869 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 MMS22LQ6ZRQ5 1243 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 SYNDIG1LA6NDD5 238 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 GH1P01241 217 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 RASA1P20936 1047 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 MAGEA9P43362 315 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 TBCCQ15814 346 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 AGAP3Q96P47 875 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 TEX12Q9BXU0 123 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 ASPSCR1Q9BZE9 553 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
SCN8A-209ENST00000627620 TEKT2Q9UIF3 430 aa13.5□□□□□ -0.25
SCN8A-209ENST00000627620 SYDE1Q6ZW31 735 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 CCDC22O60826 627 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 HSPA9P38646 679 aaKnown RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 P3H1Q32P28 736 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 AP2B1P63010 937 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 MCEEQ96PE7 176 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 TMEM117Q9H0C3 514 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 EML4Q9HC35 981 aaKnown RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 SSU72P8A0A1W2PR75 194 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 MYO1CO00159 1063 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 ZNF197O14709 1029 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 TADA2AO75478 443 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 PDGFRBP09619 1106 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 PDLIM2Q96JY6 352 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 TRABDQ9H4I3 376 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 TRIM45Q9H8W5 580 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 TRPC7Q9HCX4 862 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 SLC26A4O43511 780 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 CYP2C19P33261 490 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 PRKCEQ02156 737 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 ARL8AQ96BM9 186 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 CLMNQ96JQ2 1002 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 MED15Q96RN5 788 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
SCN8A-209ENST00000627620 SNX5Q9Y5X3 404 aa13.49□□□□□ -0.25
SCN8A-209ENST00000627620 GOLGA8RI6L899 631 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 PHF2O75151 1096 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 APRTP07741 180 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 VSNL1P62760 191 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 SNAPC2Q13487 334 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
SCN8A-209ENST00000627620 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 MAGEB2O15479 319 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 CYBBP04839 570 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 ANTXR2P58335 489 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 TMEM62Q0P6H9 643 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 TMED1Q13445 227 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 RFC5P40937 340 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 SENP1Q9P0U3 644 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 GFAPP14136 432 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 PPP4R4Q6NUP7 873 aa13.48□□□□□ -0.25
SCN8A-209ENST00000627620 USP33Q8TEY7 942 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms