RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, human

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-215	ENST00000624145	TTLL4	Q14679	1199 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	UBE2S	Q16763	222 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIM16L	Q309B1	348 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SRL	Q86TD4	932 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CYP4Z1	Q86W10	505 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	APLF	Q8IW19	511 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TNIP3	Q96KP6	325 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MXD3	Q9BW11	206 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RNPEP	Q9H4A4	650 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MLXIPL	Q9NP71	852 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	NMRK1	Q9NWW6	199 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PI4KB	Q9UBF8	816 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SPATA2	Q9UM82	520 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SH3BP1	Q9Y3L3	701 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	URB2	Q14146	1524 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PARD3	Q8TEW0	1356 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145		A0A0D9SFI3	127 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PNMA6F	A0A0J9YX94	578 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	HEATR9	A2RTY3	570 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PDZK1P1	A8MUH7	402 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	USP1	O94782	785 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	GGPS1	O95749	300 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FGA	P02671	866 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIM49	P0CI25	452 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIM49C	P0CI26	452 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MYL2	P10916	166 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	LCP1	P13796	627 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FEN1	P39748	380 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	VSNL1	P62760	191 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KDSR	Q06136	332 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MMRN1	Q13201	1228 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	COG2	Q14746	738 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RHOT1	Q8IXI2	618 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	XXYLT1	Q8NBI6	393 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	STKLD1	Q8NE28	680 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FRMD6	Q96NE9	622 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FAM213A	Q9BRX8	229 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ADI1	Q9BV57	179 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MRPL4	Q9BYD3	311 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SERHL2	Q9H4I8	314 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	SERHL	Q9NQF3	203 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CNGB3	Q9NQW8	809 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZNF302	Q9NR11	478 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	POLR3E	Q9NVU0	708 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TUBGCP4	Q9UGJ1	667 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MTMR6	Q9Y217	621 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CARMIL3	Q8ND23	1372 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MAP3K1	Q13233	1512 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	EIF4E1B	A6NMX2	242 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145		E9PBE3	544 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ALB	P02768	609 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	POTEI	P0CG38	1075 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CHI3L1	P36222	383 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MLH1	P40692	756 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RFX3	P48380	749 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CCT8	P50990	548 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PRELP	P51888	382 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	AP3M2	P53677	418 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDH6	P55285	790 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	RPS6	P62753	249 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PLOD1	Q02809	727 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CDC16	Q13042	620 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IZUMO3	Q5VZ72	239 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ESRP1	Q6NXG1	681 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KDELC2	Q7Z4H8	507 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IFNE	Q86WN2	208 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	COMMD2	Q86X83	199 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	HS6ST3	Q8IZP7	471 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MMGT1	Q8N4V1	131 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZNF614	Q8N883	585 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	POMGNT2	Q8NAT1	580 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	C19orf18	Q8NEA5	215 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KRT35	Q92764	455 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PTPRN2	Q92932	1015 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	REXO4	Q9GZR2	422 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	WNT8A	Q9H1J5	351 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZSWIM6	Q9HCJ5	1215 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ZNF304	Q9HCX3	659 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	ADAMTS1	Q9UHI8	967 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	KDM5B	Q9UGL1	1544 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	GRID2IP	A4D2P6	1211 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	FAM187A	A6NFU0	413 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	PSMD14	O00487	310 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIM24	O15164	1050 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	HSPA9	P38646	679 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	STAT3	P40763	770 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	TRIM25	Q14258	630 aa	Known RBP	4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MDH1B	Q5I0G3	518 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	DAB2IP	Q5VWQ8	1189 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	IL31	Q6EBC2	164 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	MICALL2	Q8IY33	904 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CLMN	Q96JQ2	1002 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	CAMKK2	Q96RR4	588 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	COQ7	Q99807	217 aa		4.24	□□□□□ -1.73
ANKRD28-215	ENST00000624145	APOL5	Q9BWW9	433 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms