RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PLCB4Q15147 1175 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 VPS72Q15906 364 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 HABP4Q5JVS0 413 aaKnown RBP17.08■□□□□ 0.32
GABRB3-215ENST00000622697 FBXL16Q8N461 479 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 C18orf8Q96DM3 657 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 SENP7Q9BQF6 1050 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 SGPL1O95470 568 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 PSMC6P62333 389 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 GIT2Q14161 759 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 WDR93Q6P2C0 686 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
GABRB3-215ENST00000622697 SCFD1Q8WVM8 642 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 KCNN4O15554 427 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 ENTPD3O75355 529 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 CENPPQ6IPU0 288 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 CCNYL1Q8N7R7 359 aa17.08■□□□□ 0.32
GABRB3-215ENST00000622697 TOPORSQ9NS56 1045 aaPredicted RBP17.08■□□□□ 0.32
GABRB3-215ENST00000622697 OCRLQ01968 901 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 CDR2LQ86X02 465 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-215ENST00000622697 NPHS2Q9NP85 383 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 PSD3Q9NYI0 1048 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 TMEM120BA0PK00 339 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ITIH2P19823 946 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 XKR3Q5GH77 459 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 OSBPL8Q9BZF1 889 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ANXA13P27216 316 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 RAD23BP54727 409 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ATG4AQ8WYN0 398 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 PPP1R36Q96LQ0 422 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 FGFR1OP2Q9NVK5 253 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 TTC36A6NLP5 189 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ARP10275 920 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 MDM2Q00987 491 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-215ENST00000622697 EMC2Q15006 297 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 ZNF571Q7Z3V5 609 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-215ENST00000622697 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 BBS5Q8N3I7 341 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 MMP19Q99542 508 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
GABRB3-215ENST00000622697 WDR46O15213 610 aaKnown RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ATP5HO75947 161 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 PMLP29590 882 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SESN2P58004 480 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 COG2Q14746 738 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 PTGISQ16647 500 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 TAF1BQ53T94 588 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SPATS2LQ9NUQ6 558 aaKnown RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 AGAP1Q9UPQ3 857 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 AKAP3O75969 853 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 APRTP07741 180 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 RGS9BPQ6ZS82 235 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 RCOR2Q8IZ40 523 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ABCF3Q9NUQ8 709 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 COPS2P61201 443 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SATB1Q01826 763 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 TBX2Q13207 712 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SCN4BQ8IWT1 228 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 BNIP3LO60238 219 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SASH3O75995 380 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 SDCCAG3Q96C92 435 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 YIPF3Q9GZM5 350 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 FAF1Q9UNN5 650 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ARL2BPQ9Y2Y0 163 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 S100BP04271 92 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-215ENST00000622697 GLI1P08151 1106 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 RALAP11233 206 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ANKRD20A4Q4UJ75 823 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 CYP4A22Q5TCH4 519 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
GABRB3-215ENST00000622697 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms