RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 MIGA2Q7L4E1 593 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 STK33Q9BYT3 514 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 ZNF219Q9P2Y4 722 aaPredicted RBP13.27□□□□□ -0.29
LITAF-221ENST00000622633 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 STK38LQ9Y2H1 464 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 NR2E1Q9Y466 385 aa13.27□□□□□ -0.29
LITAF-221ENST00000622633 IGSF9BQ9UPX0 1349 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
LITAF-221ENST00000622633 WFS1O76024 890 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 CTNNA1P35221 906 aaKnown RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 ITIH4Q14624 930 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 SH2D4BQ5SQS7 431 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 DACT2Q5SW24 774 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 LRIG3Q6UXM1 1119 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 LRRC43Q8N309 656 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 KIF2BQ8N4N8 673 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 EIF1ADQ8N9N8 165 aaKnown RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 UHMK1Q8TAS1 419 aaKnown RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.29
LITAF-221ENST00000622633 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 SNX27Q96L92 541 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 ARHGEF3Q9NR81 526 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 TUBA8Q9NY65 449 aaPredicted RBP13.26□□□□□ -0.29
LITAF-221ENST00000622633 ITGB1BP2Q9UKP3 347 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 DAAM1Q9Y4D1 1078 aa13.26□□□□□ -0.29
LITAF-221ENST00000622633 E7ENQ6 273 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CCDC188H7C350 402 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 PSMD10O75832 226 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 FGGP02679 453 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CYP1A1P04798 512 aaPredicted RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 ITGA2BP08514 1039 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 LMNB1P20700 586 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 RAD23BP54727 409 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 LACTBP83111 547 aaPredicted RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 ZNF844Q08AG5 666 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 PLS1Q14651 629 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 KIAA1755Q5JYT7 1200 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ADAT2Q7Z6V5 191 aaKnown RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 SCUBE1Q8IWY4 988 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 OSBPL10Q9BXB5 764 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 SPATA16Q9BXB7 569 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 DPH5Q9H2P9 285 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 SEPT11Q9NVA2 429 aaKnown RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 WRAP73Q9P2S5 460 aaPredicted RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 UBOX5O94941 541 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ASLP04424 464 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ALDH2P05091 517 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
LITAF-221ENST00000622633 CALB2P22676 271 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ECE1P42892 770 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CACNA2D1P54289 1103 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 NPEPPSP55786 919 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CCDC174Q6PII3 467 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 FAM178BQ8IXR5 827 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 ARHGEF26Q96DR7 871 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 FIZ1Q96SL8 496 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 GPR88Q9GZN0 384 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
LITAF-221ENST00000622633 AGPAT3Q9NRZ7 376 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
LITAF-221ENST00000622633 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
LITAF-221ENST00000622633 COPB2P35606 906 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SF3A3Q12874 501 aaKnown RBP eCLIP13.24□□□□□ -0.29
LITAF-221ENST00000622633 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
LITAF-221ENST00000622633 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms