RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	ZMYM2	Q9UBW7	1377 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	NCAN	O14594	1321 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	C4orf47	A7E2U8	309 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	NRG2	O14511	850 aa	Predicted RBP	11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	STBD1	O95210	358 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	KIF4A	O95239	1232 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	CCDC192	P0DO97	292 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	PSMC3	P17980	439 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	PFKFB3	Q16875	520 aa	Predicted RBP	11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	UVSSA	Q2YD98	709 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	WDR44	Q5JSH3	913 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	FAM171A1	Q5VUB5	890 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	LRCH2	Q5VUJ6	765 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	DAB2IP	Q5VWQ8	1189 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	KIAA1211L	Q6NV74	962 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	GSTCD	Q8NEC7	633 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	DEPDC1B	Q8WUY9	529 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	CCDC51	Q96ER9	411 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	MSANTD3	Q96H12	275 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	ASB16	Q96NS5	453 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	JPH2	Q9BR39	696 aa	Predicted RBP	11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	PAAF1	Q9BRP4	392 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	TEKT3	Q9BXF9	490 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	GIT1	Q9Y2X7	761 aa		11.46	□□□□□ -0.57
RRP12-215	ENST00000622320	ESYT2	A0FGR8	921 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	TSPAN1	O60635	241 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PFKFB2	O60825	505 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	CIITA	P33076	1130 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	RAB33A	Q14088	237 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	ANKRD1	Q15327	319 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PRSS36	Q5K4E3	855 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PLA2G4F	Q68DD2	849 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	NOTUM	Q6P988	496 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PDXDC1	Q6P996	788 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	C1orf228	Q6PIY5	440 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	MIER3	Q7Z3K6	550 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PDZD3	Q86UT5	571 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	HACE1	Q8IYU2	909 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	REXO1	Q8N1G1	1221 aa	Known RBP	11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	RDM1	Q8NG50	284 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	PSPC1	Q8WXF1	523 aa	Known RBP	11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	TCEAL4	Q96EI5	215 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	CPB2	Q96IY4	423 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	RIT2	Q99578	217 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	NCOA5	Q9HCD5	579 aa	Known RBP	11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	TPCN1	Q9ULQ1	816 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	NEUROG3	Q9Y4Z2	214 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	NBEA	Q8NFP9	2946 aa		11.45	□□□□□ -0.58
RRP12-215	ENST00000622320	WDR27	A2RRH5	827 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CASTOR2	A6NHX0	329 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SLC38A8	A6NNN8	435 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	ARNTL	O00327	626 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	ZNF263	O14978	683 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	ADAMTS3	O15072	1205 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	MSH4	O15457	936 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	HYAL3	O43820	417 aa	Predicted RBP	11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SRGAP2C	P0DJJ0	459 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CEACAM1	P13688	526 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CSRP1	P21291	193 aa	Known RBP	11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	OR1D2	P34982	312 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SOX9	P48436	509 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	PXN	P49023	591 aa	Predicted RBP	11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	NEK4	P51957	841 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CCT2	P78371	535 aa	Known RBP	11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	DGKK	Q5KSL6	1271 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	ANO5	Q75V66	913 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	RTL10	Q7L3V2	364 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CSGALNACT1	Q8TDX6	532 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SLC7A3	Q8WY07	619 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SLC5A5	Q92911	643 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	SMARCD2	Q92925	531 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	GJA10	Q969M2	543 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	C22orf23	Q9BZE7	217 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	TRIM6	Q9C030	488 aa	Predicted RBP	11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	ZMYND12	Q9H0C1	365 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	CSRNP2	Q9H175	543 aa		11.44	□□□□□ -0.58
RRP12-215	ENST00000622320	MAST4	O15021	2626 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	LNP1	A1A4G5	178 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	DDX11L8	A8MPP1	907 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	EXTL3	O43909	919 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	AKAP3	O75969	853 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	LRG1	P02750	347 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	PTPN2	P17706	415 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	AKAP5	P24588	427 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	AXL	P30530	894 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	KPNA1	P52294	538 aa	Predicted RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	MLLT6	P55198	1093 aa	Predicted RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	LAMTOR4	Q0VGL1	99 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	SCRN1	Q12765	414 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	ELAVL2	Q12926	359 aa	Known RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	TUSC3	Q13454	348 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	TXNDC11	Q6PKC3	985 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	FAM177A1	Q8N128	213 aa	Predicted RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	RNF149	Q8NC42	400 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	PRPF31	Q8WWY3	499 aa	Known RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	TMEM143	Q96AN5	459 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	CORO1B	Q9BR76	489 aa		11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	LARP6	Q9BRS8	491 aa	Known RBP	11.43	□□□□□ -0.58
RRP12-215	ENST00000622320	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms