RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NPR1P16066 1061 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 SLC7A1P30825 629 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 APBA1Q02410 837 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 KCNA10Q16322 511 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 ATP2B3Q16720 1220 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 FAM83BQ5T0W9 1011 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 EMC10Q5UCC4 262 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 AFMIDQ63HM1 303 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 OTUD7BQ6GQQ9 843 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 ADGRE4PQ86SQ3 457 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 FAM124AQ86V42 546 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 TMEM151BQ8IW70 566 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 OR2C3Q8N628 320 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 ACRBPQ8NEB7 543 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 DEPTORQ8TB45 409 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 CEP95Q96GE4 821 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 ZC3H10Q96K80 434 aaKnown RBP6.07□□□□□ -1.44
CPNE3-213ENST00000622183 KCNH6Q9H252 994 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 CNNM1Q9NRU3 951 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 PIH1D1Q9NWS0 290 aaKnown RBP6.07□□□□□ -1.44
CPNE3-213ENST00000622183 NCDNQ9UBB6 729 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 RUVBL1Q9Y265 456 aaKnown RBP6.07□□□□□ -1.44
CPNE3-213ENST00000622183 PCDHA1Q9Y5I3 950 aa6.07□□□□□ -1.44
CPNE3-213ENST00000622183 USP19O94966 1318 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 KITP10721 976 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 EN2P19622 333 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-213ENST00000622183 NPEPPSP55786 919 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 MRPL49Q13405 166 aaKnown RBP6.06□□□□□ -1.44
CPNE3-213ENST00000622183 DHX8Q14562 1220 aaKnown RBP6.06□□□□□ -1.44
CPNE3-213ENST00000622183 CNGA2Q16280 664 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 GRAMD1BQ3KR37 738 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 PABPC1LQ4VXU2 614 aaKnown RBP6.06□□□□□ -1.44
CPNE3-213ENST00000622183 KHDC1LQ5JSQ8 128 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 SEM1Q6ZVN7 128 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 CELF5Q8N6W0 485 aaKnown RBP6.06□□□□□ -1.44
CPNE3-213ENST00000622183 KBTBD7Q8WVZ9 684 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 SUCLG2Q96I99 432 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 ZNF287Q9HBT7 754 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 PCDHA6Q9UN73 950 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 CORO2BQ9UQ03 480 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 ZMYM3Q14202 1370 aa6.06□□□□□ -1.44
CPNE3-213ENST00000622183 MATN2O00339 956 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 TBX3O15119 743 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 KPNA5O15131 536 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 GRM6O15303 877 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 MTHFD1P11586 935 aaKnown RBP6.05□□□□□ -1.44
CPNE3-213ENST00000622183 PIK3CGP48736 1102 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 ARFIP2P53365 341 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 RAC3P60763 192 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 FMO1Q01740 532 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 CREMQ03060 361 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 PTH1RQ03431 593 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 BTKQ06187 659 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 ZNF543Q08ER8 600 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 KIAA2012Q0VF49 1180 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 RIN1Q13671 783 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 KRT72Q14CN4 511 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 C1orf228Q6PIY5 440 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 IL17RDQ8NFM7 739 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 MSLNLQ96KJ4 702 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 RIPOR3Q96MK2 946 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 MRI1Q9BV20 369 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 SELENOOQ9BVL4 669 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 UNKQ9C0B0 810 aaKnown RBP6.05□□□□□ -1.44
CPNE3-213ENST00000622183 PTPRHQ9HD43 1115 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-213ENST00000622183 SLC23A1Q9UHI7 598 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 ZDHHC8Q9ULC8 765 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 OGDHLQ9ULD0 1010 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 PADI4Q9UM07 663 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 SNX13Q9Y5W8 968 aa6.05□□□□□ -1.44
CPNE3-213ENST00000622183 UBE2QL1A1L167 161 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 PJA2O43164 708 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 MATN4O95460 622 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 AHSGP02765 367 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 RAP2AP10114 183 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 BRAFP15056 766 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 ATP5JP18859 108 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 SLURP1P55000 103 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 STK3Q13188 491 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 DGKKQ5KSL6 1271 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 ERAP2Q6P179 960 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 SHCBP1Q8NEM2 672 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 VPS37AQ8NEZ2 397 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 BORCS6Q96GS4 357 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 TRIM54Q9BYV2 358 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 STARD7Q9NQZ5 370 aa6.04□□□□□ -1.44
CPNE3-213ENST00000622183 A0A1W2PRX2 142 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 KLRG2A4D1S0 409 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CXorf49A8MYA2 514 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 B5MCH6 92 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 HOXA3O43365 443 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CREB3O43889 395 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms