RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 SURF1Q15526 300 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 STX1AQ16623 288 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 PPP2R2DQ66LE6 453 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 COLGALT2Q8IYK4 626 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 FAM212AQ96EL1 285 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 SAMD11Q96NU1 681 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 FAM193BQ96PV7 902 aaPredicted RBP18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 MED15Q96RN5 788 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 TGS1Q96RS0 853 aaKnown RBP18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 MKNK1Q9BUB5 465 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 AAASQ9NRG9 546 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 RWDD3Q9Y3V2 267 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 PRUNE2Q8WUY3 3088 aa18.96■□□□□ 0.63
SLC6A6-209ENST00000622176 TRIP11Q15643 1979 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 TMEM265A0A087WTH1 108 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 CARNS1A5YM72 827 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 GALTP07902 379 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 PSMC2P35998 433 aaKnown RBP18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 BMPR1AP36894 532 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 TYRO3Q06418 890 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 SPAG1Q07617 926 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 SPOUT1Q5T280 376 aaKnown RBP18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 JADE1Q6IE81 842 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 NT5DC4Q86YG4 428 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 COLGALT1Q8NBJ5 622 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 KIF12Q96FN5 646 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 CEP63Q96MT8 703 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 C17orf80Q9BSJ5 609 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 PDE11AQ9HCR9 933 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 DNAJB4Q9UDY4 337 aa18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 UBQLN1Q9UMX0 589 aaKnown RBP18.95■□□□□ 0.62
SLC6A6-209ENST00000622176 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 ALDH2P05091 517 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 NFICP08651 508 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 CYP3A5P20815 502 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 ALDH7A1P49419 539 aaKnown RBP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 BCAR1P56945 870 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 MCCD1P59942 119 aaPredicted RBP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 SOX4Q06945 474 aaPredicted RBP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 TMEM132DQ14C87 1099 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 ZSCAN23Q3MJ62 389 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 KCNT2Q6UVM3 1135 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 SPRED2Q7Z698 418 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 EFCAB13Q8IY85 973 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 FAM186BQ8IYM0 893 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 CSGALNACT2Q8N6G5 542 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 C18orf25Q96B23 403 aaPredicted RBP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 EEF2KMTQ96G04 330 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 BORCS6Q96GS4 357 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 ZNF558Q96NG5 402 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 FUCA2Q9BTY2 467 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 PLVAPQ9BX97 442 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 GZF1Q9H116 711 aaPredicted RBP18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 PCDHB12Q9Y5F1 795 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 RALGAPA2Q2PPJ7 1873 aa18.94■□□□□ 0.62
SLC6A6-209ENST00000622176 SYCE3A1L190 88 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 C5orf67F2Z3F1 127 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 SLC16A3O15427 465 aaKnown RBP18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 XPOTO43592 962 aaKnown RBP18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 RB1P06400 928 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 CCDC192P0DO97 292 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 SLC11A1P49279 550 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 ENPEPQ07075 957 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 EPC2Q52LR7 807 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 SPATA1Q5VX52 437 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 INTS8Q75QN2 995 aaKnown RBP18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 FILIP1Q7Z7B0 1213 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 PLEKHO2Q8TD55 490 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 TMC2Q8TDI7 906 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 PARD3BQ8TEW8 1205 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 CCDC127Q96BQ5 260 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 UROC1Q96N76 676 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 ZNF576Q9H609 170 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 MTMR10Q9NXD2 777 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
SLC6A6-209ENST00000622176 TDRD15B5MCY1 1934 aaKnown RBP18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 CASTOR2A6NHX0 329 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 NRP1O14786 923 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 FGFR1OPO95684 399 aaKnown RBP18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 EPB41P11171 864 aaKnown RBP18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 LRPAP1P30533 357 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 RPL9P32969 192 aaKnown RBP18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 CTNNB1P35222 781 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 CLDN10P78369 228 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 WDR49Q8IV35 697 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 SLC39A11Q8N1S5 342 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 BEST2Q8NFU1 509 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 DDX27Q96GQ7 796 aaKnown RBP18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 FNBP1Q96RU3 617 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 CGRRF1Q99675 332 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 INTS13Q9NVM9 706 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 FAN1Q9Y2M0 1017 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 ANK1P16157 1881 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 CHD7Q9P2D1 2997 aa18.92■□□□□ 0.62
SLC6A6-209ENST00000622176 PDCD11Q14690 1871 aaKnown RBP18.91■□□□□ 0.62
SLC6A6-209ENST00000622176 DLATP10515 647 aaKnown RBP18.91■□□□□ 0.62
SLC6A6-209ENST00000622176 PPM1AP35813 382 aa18.91■□□□□ 0.62
SLC6A6-209ENST00000622176 PBX3P40426 434 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms