RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SH2B1Q9NRF2 756 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-210ENST00000621245 FNIP2Q9P278 1114 aa12.6□□□□□ -0.39
CPNE3-210ENST00000621245 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
CPNE3-210ENST00000621245 FBXW11Q9UKB1 542 aa12.6□□□□□ -0.39
CPNE3-210ENST00000621245 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
CPNE3-210ENST00000621245 FANCMQ8IYD8 2048 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 KRBA1A5PL33 1030 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 ABLIM1O14639 778 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 HIP1RO75146 1068 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 THP07101 528 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 NPTX2P47972 431 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 CLCNKBP51801 687 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 PEX3P56589 373 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 OSTNP61366 133 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 TDGQ13569 410 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 PSMD5Q16401 504 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 CEP57Q86XR8 500 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-210ENST00000621245 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
CPNE3-210ENST00000621245 PNMA5Q96PV4 448 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
CPNE3-210ENST00000621245 NOL7Q9UMY1 257 aaKnown RBP12.59□□□□□ -0.39
CPNE3-210ENST00000621245 SSX2IPQ9Y2D8 614 aa12.59□□□□□ -0.39
CPNE3-210ENST00000621245 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 CCL16O15467 120 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 NR1I2O75469 434 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 COL4A2P08572 1712 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 CFHP08603 1231 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 TKTP29401 623 aaKnown RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 BRCC3P46736 316 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 DCAF4L1Q3SXM0 396 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 SEZ6Q53EL9 994 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 RINT1Q6NUQ1 792 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 POTEHQ6S545 545 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 SIX5Q8N196 739 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 ZBTB45Q96K62 511 aaPredicted RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 PLIN2Q99541 437 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 ACO2Q99798 780 aaKnown RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 EPAS1Q99814 870 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 TTPALQ9BTX7 342 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 RPP25Q9BUL9 199 aaKnown RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 PRKD2Q9BZL6 878 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 PTPRHQ9HD43 1115 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPNE3-210ENST00000621245 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 EPS15L1Q9UBC2 864 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 PHLPP2Q6ZVD8 1323 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.4
CPNE3-210ENST00000621245 CACNA1IQ9P0X4 2223 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 C7P10643 843 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 MUTP22033 750 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 FGFR3P22607 806 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 PPP2R5AQ15172 486 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 C1orf186Q6ZWK4 172 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 GRASPQ7Z6J2 395 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ITFG1Q8TB96 612 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-210ENST00000621245 C18orf25Q96B23 403 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-210ENST00000621245 IFT74Q96LB3 600 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 RHOBTB2Q9BYZ6 727 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 HAPLN2Q9GZV7 340 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 PLEKHA4Q9H4M7 779 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ZDHHC7Q9NXF8 308 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 TNFSF13BQ9Y275 285 aa12.57□□□□□ -0.4
CPNE3-210ENST00000621245 TICRRQ7Z2Z1 1910 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SLC16A4O15374 487 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 MAP3K7O43318 606 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 C8AP07357 584 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 HARSP12081 509 aaKnown RBP12.56□□□□□ -0.4
CPNE3-210ENST00000621245 LAMP2P13473 410 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 PROZP22891 400 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 OR1D2P34982 312 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 GRM5P41594 1212 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 ATP2C1P98194 919 aaPredicted RBP12.56□□□□□ -0.4
CPNE3-210ENST00000621245 HTR4Q13639 388 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 PDIA5Q14554 519 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 UPP1Q16831 310 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 MCTP1Q6DN14 999 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 ALKAL1Q6UXT8 129 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
CPNE3-210ENST00000621245 SLC7A14Q8TBB6 771 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms