RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZNF484Q5JVG2 852 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 TMEM270Q6UE05 265 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 ZPBP2Q6X784 338 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 RASAL3Q86YV0 1011 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 FAM71AQ8IYT1 594 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 TMEM174Q8WUU8 243 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 TSPYL1Q9H0U9 437 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 SETD4Q9NVD3 440 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 PCDHGC5Q9Y5F6 944 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 OGTO15294 1046 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 ERLIN1O75477 346 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 GRIK4Q16099 956 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 CCL14Q16627 93 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 DGKDQ16760 1214 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 ZACNQ401N2 412 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 SHC3Q92529 594 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 GDAP1L1Q96MZ0 367 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 ZNF446Q9NWS9 450 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 DAAM1Q9Y4D1 1078 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 ERLIN2O94905 339 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 PIGRP01833 764 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 MMP3P08254 477 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 NOP14P78316 857 aaKnown RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 SLC7A5Q01650 507 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 DUSP28Q4G0W2 176 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 GSPT2Q8IYD1 628 aaKnown RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 RFFLQ8WZ73 363 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 AMFRQ9UKV5 643 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 COQ4Q9Y3A0 265 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 STYXL1Q9Y6J8 313 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 UMODL1Q5DID0 1318 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 SLC15A5A6NIM6 579 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 TNPO2O14787 897 aaKnown RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 PPFIA4O75335 1185 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 C4BPAP04003 597 aaKnown RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 CXCL8P10145 99 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 MESDQ14696 234 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 C2CD6Q53TS8 623 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 SCARA3Q6AZY7 606 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 CC2D1AQ6P1N0 951 aaPredicted RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 KLHL7Q8IXQ5 586 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 SYCE1Q8N0S2 351 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 SPATA4Q8NEY3 305 aa10.66□□□□□ -0.7
VTA1-205ENST00000620996 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
VTA1-205ENST00000620996 IGKV6-21A0A0C4DH24 114 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 ANKRD62A6NC57 917 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 ACKR2O00590 384 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 KIF4AO95239 1232 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 VNN1O95497 513 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MYL3P08590 195 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 SCP2P22307 547 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 PTENP60484 403 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MBTD1Q05BQ5 628 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 CDCA2Q69YH5 1023 aaPredicted RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 RGMBQ6NW40 437 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MAMDC4Q6UXC1 1216 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 ADAT2Q7Z6V5 191 aaKnown RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 RPGRIP1Q96KN7 1286 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 CCDC113Q9H0I3 377 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 RPF1Q9H9Y2 349 aaKnown RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 PLXNB2O15031 1838 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MANSC4A6NHS7 340 aaPredicted RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 MAGEB2O15479 319 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 ADCY6O43306 1168 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 ZEB2O60315 1214 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 TNNC2P02585 160 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 CHRNB2P17787 502 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MYL6P60660 151 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 CUL2Q13617 745 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 KCTD19Q17RG1 926 aaPredicted RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 C8orf74Q6P047 294 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 MTHFD1LQ6UB35 978 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 TMEM192Q8IY95 271 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 CPA5Q8WXQ8 436 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 BTBD6Q96KE9 485 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 C16orf70Q9BSU1 422 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 SELENOOQ9BVL4 669 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 APOBEC3GQ9HC16 384 aaKnown RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 RBM12Q9NTZ6 932 aaKnown RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 LCMT1Q9UIC8 334 aa10.65□□□□□ -0.7
VTA1-205ENST00000620996 NOCTQ9UK39 431 aaKnown RBP10.65□□□□□ -0.7
VTA1-205ENST00000620996 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.71
VTA1-205ENST00000620996 THAP12O43422 761 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 RTN2O75298 545 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
VTA1-205ENST00000620996 IQCF3P0C7M6 154 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 TUBB4BP68371 445 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 GPC5P78333 572 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 BEX3Q00994 111 aa10.64□□□□□ -0.71
VTA1-205ENST00000620996 FMO1Q01740 532 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms