RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 NAB2Q15742 525 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 E2F4Q16254 413 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 SEZ6Q53EL9 994 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 ZC2HC1CQ53FD0 456 aaPredicted RBP17.47■□□□□ 0.39
BRCA1-228ENST00000618469 FUT10Q6P4F1 479 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 MAP4K3Q8IVH8 894 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 STAMQ92783 540 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 PPP1R10Q96QC0 940 aaKnown RBP17.47■□□□□ 0.39
BRCA1-228ENST00000618469 TNMDQ9H2S6 317 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 HCFC2Q9Y5Z7 792 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 IRAK3Q9Y616 596 aa17.47■□□□□ 0.39
BRCA1-228ENST00000618469 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 CLASP2O75122 1294 aaKnown RBP17.46■□□□□ 0.39
BRCA1-228ENST00000618469 PIGRP01833 764 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 GAP43P17677 238 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 ABCD1P33897 745 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 GTF2BQ00403 316 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-228ENST00000618469 HAPLN2Q9GZV7 340 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 MRPL44Q9H9J2 332 aaKnown RBP17.46■□□□□ 0.39
BRCA1-228ENST00000618469 GOLGA2P5Q9HBQ8 144 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
BRCA1-228ENST00000618469 FAM13BQ9NYF5 915 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 TBC1D7Q9P0N9 293 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 SEL1LQ9UBV2 794 aa17.46■□□□□ 0.39
BRCA1-228ENST00000618469 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.38
BRCA1-228ENST00000618469 SMIM28A0A1B0GU29 152 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 CXCL8P10145 99 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 KCNC3Q14003 757 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 PTPN21Q16825 1174 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 KIAA1841Q6NSI8 718 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 TAS1R1Q7RTX1 841 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 CASP10Q92851 521 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 HVCN1Q96D96 273 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 B3GALT6Q96L58 329 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 EMILIN2Q9BXX0 1053 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 GPR62Q9BZJ7 368 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 ST6GALNAC4Q9H4F1 302 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 CNTN3Q9P232 1028 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 MYO15AQ9UKN7 3530 aa17.45■□□□□ 0.38
BRCA1-228ENST00000618469 FRMD3A2A2Y4 597 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
BRCA1-228ENST00000618469 MEFVO15553 781 aaPredicted RBP17.44■□□□□ 0.38
BRCA1-228ENST00000618469 TADA2AO75478 443 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 GCNT3O95395 438 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 EFEMP2O95967 443 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 SOX4Q06945 474 aaPredicted RBP17.44■□□□□ 0.38
BRCA1-228ENST00000618469 XKR4Q5GH76 650 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 ANKRD54Q6NXT1 300 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 SLC39A4Q6P5W5 647 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
BRCA1-228ENST00000618469 SUSD6Q92537 303 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 ZMAT2Q96NC0 199 aaKnown RBP17.44■□□□□ 0.38
BRCA1-228ENST00000618469 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 LRRC27Q9C0I9 530 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 OLFML3Q9NRN5 406 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 SLC38A7Q9NVC3 462 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 KBTBD4Q9NVX7 518 aa17.44■□□□□ 0.38
BRCA1-228ENST00000618469 TCHHQ07283 1943 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 TISP43B9A030 160 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 PPP1R37O75864 691 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 CNPP09543 421 aaKnown RBP17.43■□□□□ 0.38
BRCA1-228ENST00000618469 EPCAMP16422 314 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 TNFSF9P41273 254 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 CLCNKBP51801 687 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 CASP5P51878 434 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 ASIC1P78348 528 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 USP41Q3LFD5 358 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 ALKAL1Q6UXT8 129 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 TMEM184AQ6ZMB5 413 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 ZNF720Q7Z2F6 126 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 CCDC65Q8IXS2 484 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 KREMEN2Q8NCW0 462 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 RIPOR3Q96MK2 946 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 UROC1Q96N76 676 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 KLHL5Q96PQ7 755 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 TRIM9Q9C026 710 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 MAGEF1Q9HAY2 307 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 SSX2IPQ9Y2D8 614 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
BRCA1-228ENST00000618469 ANKRD63C9JTQ0 380 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 OGTO15294 1046 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 FAM189A1O60320 539 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 CLTAP09496 248 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 MYBP10242 640 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 KCNE1P15382 129 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 KLRC2P26717 231 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 AMPD3Q01432 767 aa17.42■□□□□ 0.38
BRCA1-228ENST00000618469 DSG1Q02413 1049 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms