RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 JCADQ9P266 1359 aa18.68■□□□□ 0.58
ATXN2-227ENST00000616825 CDH16O75309 829 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 RPA1P27694 616 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SNAPC2Q13487 334 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SYDE1Q6ZW31 735 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-227ENST00000616825 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 EFHBQ8N7U6 833 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 TRIM45Q9H8W5 580 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-227ENST00000616825 NDE1Q9NXR1 346 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 AFF4Q9UHB7 1163 aaKnown RBP18.67■□□□□ 0.58
ATXN2-227ENST00000616825 RGS7P49802 495 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 DPYDQ12882 1025 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SMAD1Q15797 465 aaKnown RBP18.67■□□□□ 0.58
ATXN2-227ENST00000616825 UGP2Q16851 508 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SH3TC2Q8TF17 1288 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SENP7Q9BQF6 1050 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 IRX2Q9BZI1 471 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-227ENST00000616825 WWP1Q9H0M0 922 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SYCE1LA8MT33 242 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 TADA2AO75478 443 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 GFAPP14136 432 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 FBXO33Q7Z6M2 555 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 AGAP3Q96P47 875 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 CASS4Q9NQ75 786 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 ZNF609O15014 1411 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 KCNN4O15554 427 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SLC25A27O95847 323 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 RFC5P40937 340 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 EPC1Q9H2F5 836 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 SNX5Q9Y5X3 404 aa18.67■□□□□ 0.58
ATXN2-227ENST00000616825 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 CFAP69A5D8W1 941 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 HNRNPCL2B2RXH8 293 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MYO1CO00159 1063 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 HNRNPCL1O60812 293 aaKnown RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 CD4P01730 458 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 CTSHP09668 335 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MAGEA9P43362 315 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 KCNJ6P48051 423 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 VPS72Q15906 364 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 ANGEL2Q5VTE6 544 aaKnown RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 XRRA1Q6P2D8 792 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 PIGHQ14442 188 aaPredicted RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 NAA30Q147X3 362 aaPredicted RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MAPRE2Q15555 327 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MMS22LQ6ZRQ5 1243 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 SCFD1Q8WVM8 642 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 FAM161BQ96MY7 647 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MAP3K14Q99558 947 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 LSM7Q9UK45 103 aaKnown RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 PCSK1P29120 753 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 FMR1Q06787 632 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 EMC2Q15006 297 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 E2F4Q16254 413 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 SLC35G2Q8TBE7 412 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 MTBPQ96DY7 904 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 GPBP1L1Q9HC44 474 aaPredicted RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 PRMT7Q9NVM4 692 aaPredicted RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 FXR1P51114 621 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 PRKCEQ02156 737 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 GLB1LQ6UWU2 654 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 RRM2BQ7LG56 351 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 DDIASQ8IXT1 998 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 DCUN1D1Q96GG9 259 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 RBM15Q96T37 977 aaKnown RBP eCLIP18.66■□□□□ 0.585e-6■■□□□ 11.5
ATXN2-227ENST00000616825 PARK7Q99497 189 aaKnown RBP18.66■□□□□ 0.58
ATXN2-227ENST00000616825 LRRC1Q9BTT6 524 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 CYP4F11Q9HBI6 524 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 GGA3Q9NZ52 723 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
ATXN2-227ENST00000616825 ZBTB17Q13105 803 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 CPA5Q8WXQ8 436 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 PBXIP1Q96AQ6 731 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 AGPAT5Q9NUQ2 364 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 ALDH1A1P00352 501 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 PDGFRBP09619 1106 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 P3H1Q32P28 736 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 NLRP14Q86W24 1093 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 ATXN7L3BQ96GX2 97 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 MXRA8Q9BRK3 442 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 RUBCNLQ9H714 662 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 CHCHD3Q9NX63 227 aaKnown RBP18.65■□□□□ 0.58
ATXN2-227ENST00000616825 TEKT2Q9UIF3 430 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 ANO5Q75V66 913 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 TRABDQ9H4I3 376 aa18.65■□□□□ 0.58
ATXN2-227ENST00000616825 ITIH2P19823 946 aa18.64■□□□□ 0.58
ATXN2-227ENST00000616825 VSNL1P62760 191 aa18.64■□□□□ 0.58
ATXN2-227ENST00000616825 RABGAP1LQ5R372 815 aa18.64■□□□□ 0.58
ATXN2-227ENST00000616825 CYP2B6P20813 491 aa18.64■□□□□ 0.57
ATXN2-227ENST00000616825 SLC38A7Q9NVC3 462 aa18.64■□□□□ 0.57
ATXN2-227ENST00000616825 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms