RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TANGO2Q6ICL3 276 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 NOTUMQ6P988 496 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 POTEHQ6S545 545 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 CEP57Q86XR8 500 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 HASPINQ8TF76 798 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 DNASE1L2Q92874 299 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 ZNF396Q96N95 335 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 PAAF1Q9BRP4 392 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 IER2Q9BTL4 223 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 TTPALQ9BTX7 342 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 CSRNP2Q9H175 543 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 LMAN1LQ9HAT1 526 aa19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 MRPS23Q9Y3D9 190 aaKnown RBP19.45■□□□□ 0.7
TRAPPC3-209ENST00000616395 FAM208BQ5VWN6 2430 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 CHURC1-FNTBB4DL54 471 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 MAN2B1O00754 1011 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 TRAK2O60296 914 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 POU2F2P09086 479 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 AXLP30530 894 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 FNTBP49356 437 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 FOSBP53539 338 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 SATB1Q01826 763 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 NPY5RQ15761 445 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 FAM171A1Q5VUB5 890 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 CCDC51Q96ER9 411 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 CEP170P1Q96L14 293 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 SCAND2PQ9GZW5 306 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 DHX33Q9H6R0 707 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 GDE1Q9NZC3 331 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 KLK14Q9P0G3 267 aa19.44■□□□□ 0.7
TRAPPC3-209ENST00000616395 TDRD15B5MCY1 1934 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 FOXD2O60548 495 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 CXCL12P48061 93 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 GRIK3Q13003 919 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 GRM2Q14416 872 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 SLC5A9Q2M3M2 681 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 ELSPBP1Q96BH3 223 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 TRIM6Q9C030 488 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 SH3GLB2Q9NR46 395 aa19.43■□□□□ 0.7
TRAPPC3-209ENST00000616395 SPEGQ15772 3267 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 TM4SF5O14894 197 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 Q4G0T1 1027 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 BRAPQ7Z569 592 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 FERMT3Q86UX7 667 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 HACE1Q8IYU2 909 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 FAM3CQ92520 227 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 SYAP1Q96A49 352 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 BRD9Q9H8M2 597 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 PCDHA4Q9UN74 947 aa19.42■□□□□ 0.7
TRAPPC3-209ENST00000616395 NOTCH4Q99466 2003 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 ZZEF1O43149 2961 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 KIF4AO95239 1232 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 TDP2O95551 362 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 RHOP08100 348 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 CEBPBP17676 345 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 FCARP24071 287 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 RFC5P40937 340 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 NCBP1Q09161 790 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 GAS6Q14393 721 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 UVSSAQ2YD98 709 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 AASDHQ4L235 1098 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 BLIDQ8IZY5 108 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 TBCKQ8TEA7 893 aa19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 WRAP73Q9P2S5 460 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC3-209ENST00000616395 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 EML1O00423 815 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 ASAP2O43150 1006 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 PRPF40AO75400 957 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 OR1D2P34982 312 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 QARSP47897 775 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 LIMK1P53667 647 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 RAB33AQ14088 237 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 PCBP1Q15365 356 aaKnown RBP eCLIP19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 SF3A2Q15428 464 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 EXOC8Q8IYI6 725 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 FAM160A2Q8N612 972 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 FBXO18Q8NFZ0 1043 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 ETNPPLQ8TBG4 499 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 TCP11Q8WWU5 503 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 RXFP3Q9NSD7 469 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 PARP2Q9UGN5 583 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 ZMIZ1Q9ULJ6 1067 aa19.4■□□□□ 0.7
TRAPPC3-209ENST00000616395 ASPMQ8IZT6 3477 aa19.39■□□□□ 0.7
TRAPPC3-209ENST00000616395 CASTOR2A6NHX0 329 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 C1QTNF9BB2RNN3 333 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 INO80B-WBP1J3KQ70 363 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 C1QTNF9P0C862 333 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 CHRNB1P11230 501 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 ARF4P18085 180 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 CNR2P34972 360 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 PTENP60484 403 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 TUSC3Q13454 348 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 EMC2Q15006 297 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 AMHR2Q16671 573 aa19.39■□□□□ 0.69
TRAPPC3-209ENST00000616395 HEATR6Q6AI08 1181 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms