RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 LDAHQ9H6V9 325 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 RIC8AQ9NPQ8 531 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TMEM59LQ9UK28 342 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 SLC13A4Q9UKG4 626 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.88□□□□□ -1.472e-7■■■□□ 14.7
RFC3-203ENST00000616236 MYBBP1AQ9BQG0 1328 aaKnown RBP5.88□□□□□ -1.47
RFC3-203ENST00000616236 SRGAP3O43295 1099 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 TBC1D4O60343 1298 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 PHF2O75151 1096 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 GFPT2O94808 682 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LY86O95711 162 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 NDST3O95803 873 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LTA4HP09960 611 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 FTH1P19P0C7X4 201 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 XBP1P17861 261 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 COPB2P35606 906 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 CD96P40200 585 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LIFRP42702 1097 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 HK2P52789 917 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 FOXO4P98177 505 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 MEF2AQ02078 507 aaPredicted RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 PRKCQQ04759 706 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 RAB30Q15771 203 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 CPSF6Q16630 551 aaKnown RBP eCLIP5.87□□□□□ -1.47
RFC3-203ENST00000616236 DGKDQ16760 1214 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 KANK2Q63ZY3 851 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 TTLL5Q6EMB2 1281 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 SULT6B1Q6IMI4 303 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LIN54Q6MZP7 749 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 PDXDC1Q6P996 788 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 RNF44Q7L0R7 432 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 FTSJ3Q8IY81 847 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 OR8H2Q8N162 312 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 PQLC1Q8N2U9 271 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 STT3BQ8TCJ2 826 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 IGDCC4Q8TDY8 1250 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 SNX33Q8WV41 574 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 RUBCNQ92622 972 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LRRC46Q96FV0 321 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 DYDC2Q96IM9 177 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 MAELQ96JY0 434 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 STK31Q9BXU1 1019 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 EIF2AQ9BY44 585 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 DPH1Q9BZG8 443 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 SMURF2Q9HAU4 748 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 DBR1Q9UK59 544 aaKnown RBP5.87□□□□□ -1.47
RFC3-203ENST00000616236 TMX2Q9Y320 296 aa5.87□□□□□ -1.47
RFC3-203ENST00000616236 F2RL2O00254 374 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 BTN3A1O00481 513 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 PIP5K1BO14986 540 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 N4BP3O15049 544 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 HOXC11O43248 304 aaPredicted RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 PSPNO60542 156 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 TBX18O95935 607 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 CYBBP04839 570 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 STAT5AP42229 794 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 SOX8P57073 446 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 CD83Q01151 205 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 APBA1Q02410 837 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 EXOSC9Q06265 439 aaKnown RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 ADAM9Q13443 819 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 UBE3CQ15386 1083 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 MAN2A1Q16706 1144 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 MST1LQ2TV78 715 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 SLC45A4Q5BKX6 768 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 GJC2Q5T442 439 aaPredicted RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 CCDC30Q5VVM6 783 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 PAQR3Q6TCH7 311 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 LIPIQ6XZB0 460 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 ZNF783Q6ZMS7 281 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 SPOCD1Q6ZMY3 1216 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 UNC13DQ70J99 1090 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 MICU3Q86XE3 530 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 FAM90A1Q86YD7 464 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 CPOQ8IVL8 374 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 FAM126BQ8IXS8 530 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 PDZD8Q8NEN9 1154 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 CYFIP2Q96F07 1278 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 PYM1Q9BRP8 204 aaKnown RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 SENP6Q9GZR1 1112 aaPredicted RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 DHX36Q9H2U1 1008 aaKnown RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 PLEKHA5Q9HAU0 1116 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 POLR3BQ9NW08 1133 aaPredicted RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 SRRDQ9UH36 339 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 DNAI1Q9UI46 699 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 VAV3Q9UKW4 847 aa5.86□□□□□ -1.47
RFC3-203ENST00000616236 SCAF8Q9UPN6 1271 aaKnown RBP5.86□□□□□ -1.47
RFC3-203ENST00000616236 A0A0B4J269 797 aa5.85□□□□□ -1.47
RFC3-203ENST00000616236 CLCA1A8K7I4 914 aa5.85□□□□□ -1.47
RFC3-203ENST00000616236 ORC4O43929 436 aa5.85□□□□□ -1.47
RFC3-203ENST00000616236 SOAT2O75908 522 aa5.85□□□□□ -1.47
RFC3-203ENST00000616236 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.475e-7■□□□□ 10.8
RFC3-203ENST00000616236 DDCP20711 480 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms