RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KIF11P52732 1056 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 GNGT1P63211 74 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CTTNQ14247 550 aaKnown RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 TUBB8Q3ZCM7 444 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CRELD2Q6UXH1 353 aaPredicted RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DCLK2Q8N568 766 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 MCPH1Q8NEM0 835 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CCHCR1Q8TD31 782 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 KIFAP3Q92845 792 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 SNX27Q96L92 541 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 ZNF570Q96NI8 536 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 FIZ1Q96SL8 496 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 REEP2Q9BRK0 252 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 TINF2Q9BSI4 451 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 BHMT2Q9H2M3 363 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 RAB21Q9UL25 225 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 ASB3Q9Y575 518 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 ARHGEF35A5YM69 484 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DGAT1O75907 488 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 GNA14O95837 355 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 SNAI1O95863 264 aaPredicted RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 GH1P01241 217 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 NCKAP1LP55160 1127 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 MAPK7Q13164 816 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CFAP157Q5JU67 520 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 NELFBQ8WX92 580 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 IQCDQ96DY2 449 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 VIPAS39Q9H9C1 493 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 NOD2Q9HC29 1040 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 ZNF302Q9NR11 478 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 GUCY2FP51841 1108 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 PMS2P54278 862 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 ARHGAP1Q07960 439 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 STK4Q13043 487 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DEFB115Q30KQ5 88 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DUSP28Q4G0W2 176 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 DEPTORQ8TB45 409 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 PMM1Q92871 262 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 MRPL46Q9H2W6 279 aaKnown RBP9.43□□□□□ -0.9
VPS11-206ENST00000614944 KCTD10Q9H3F6 313 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 R3HDMLQ9H3Y0 253 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 PARVGQ9HBI0 331 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 CIDEBQ9UHD4 219 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 TTLL3Q9Y4R7 772 aa9.43□□□□□ -0.9
VPS11-206ENST00000614944 MCM3APO60318 1980 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 ITIH6Q6UXX5 1313 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PDXKO00764 312 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 MAPK13O15264 365 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 SYF2O95926 243 aaKnown RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
VPS11-206ENST00000614944 PADI6Q6TGC4 694 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 APTXQ7Z2E3 356 aaKnown RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 CEP295NLQ96MC4 621 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 OCEL1Q9H607 264 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 ABT1Q9ULW3 272 aaKnown RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 A0A1B0GTH6 734 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 HTR3EA5X5Y0 456 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 ATP6V1G2O95670 118 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PGK2P07205 417 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PLS3P13797 630 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PRMT2P55345 433 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 FCGRTP55899 365 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 POU5F1BQ06416 359 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 CRHR2Q13324 411 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 UGCGQ16739 394 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 SH2D4BQ5SQS7 431 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 ANO5Q75V66 913 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 ERICH1Q86X53 443 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PCYT2Q99447 389 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 PLIN2Q99541 437 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 DHX33Q9H6R0 707 aaKnown RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
VPS11-206ENST00000614944 NRBP2Q9NSY0 501 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 BAIAP2L1Q9UHR4 511 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 GDAQ9Y2T3 454 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 NFE2L3Q9Y4A8 694 aa9.42□□□□□ -0.9
VPS11-206ENST00000614944 IGKV6-21A0A0C4DH24 114 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 ABLIM1O14639 778 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 ZNF862O60290 1169 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 MGEA5O60502 916 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 NFKBIAP25963 317 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 CASP1P29466 404 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 CCDC60Q8IWA6 550 aaPredicted RBP9.41□□□□□ -0.9
VPS11-206ENST00000614944 ARHGAP18Q8N392 663 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 TSG101Q99816 390 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 SMARCAD1Q9H4L7 1026 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 HAUS2Q9NVX0 235 aa9.41□□□□□ -0.9
VPS11-206ENST00000614944 GABBR1Q9UBS5 961 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms