RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ATICP31939 592 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 ATPAF2Q8N5M1 289 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 SYNDIG1Q9H7V2 258 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 MADDQ8WXG6 1647 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 EEF1B2P24534 225 aaKnown RBP21.3■■□□□ 1
CTDP1-208ENST00000613122 MDM2Q00987 491 aaPredicted RBP21.3■■□□□ 1
CTDP1-208ENST00000613122 SYTL3Q4VX76 610 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 LCA5Q86VQ0 697 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 RBBP8NLQ8NC74 664 aaPredicted RBP21.3■■□□□ 1
CTDP1-208ENST00000613122 C1orf54Q8WWF1 131 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 AP3B1O00203 1094 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 TAF11Q15544 211 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 KRT80Q6KB66 452 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 GPRASP2Q96D09 838 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 ANGPTL2Q9UKU9 493 aa21.3■■□□□ 1
CTDP1-208ENST00000613122 TCF7P36402 384 aaPredicted RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 ALDH1A3P47895 512 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 TAAR1Q96RJ0 339 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 STK33Q9BYT3 514 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 NPTXRO95502 500 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 MMEP08473 750 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 ESRRGP62508 458 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 IL31Q6EBC2 164 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 NT5C1AQ9BXI3 368 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 EPB41L4AQ9HCS5 686 aaPredicted RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 KCNH7Q9NS40 1196 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 FAM205CA6NFA0 338 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 C3orf70A6NLC5 250 aaPredicted RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 PSMD3O43242 534 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 FMO5P49326 533 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 IZUMO3Q5VZ72 239 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 DEFB132Q7Z7B7 95 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 TBC1D19Q8N5T2 526 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 CASS4Q9NQ75 786 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 CCDC195A0A1B0GUA6 201 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 MORF4L2Q15014 288 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 SMAD1Q15797 465 aaKnown RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 FASTKD1Q53R41 847 aaKnown RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 DDX47Q9H0S4 455 aaKnown RBP21.29■■□□□ 1
CTDP1-208ENST00000613122 IGSF9BQ9UPX0 1349 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 STAG3L1P0CL83 205 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 MYBP10242 640 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 ACTR2P61160 394 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 RCOR2Q8IZ40 523 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 MAP3K14Q99558 947 aa21.29■■□□□ 1
CTDP1-208ENST00000613122 TRPA1O75762 1119 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 KITP10721 976 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 ARSEP51690 589 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 SDE2Q6IQ49 451 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 PLEKHH3Q7Z736 793 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 TBC1D1Q86TI0 1168 aaPredicted RBP21.28■■□□□ 1
CTDP1-208ENST00000613122 CPA5Q8WXQ8 436 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 SENP7Q9BQF6 1050 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 COG4Q9H9E3 785 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 KCNN4O15554 427 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 ACADSBP45954 432 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 RDM1Q8NG50 284 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 TEX12Q9BXU0 123 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 AIPL1Q9NZN9 384 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 CAPN11Q9UMQ6 739 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 TYK2P29597 1187 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 CLCN6P51797 869 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 TGFB2P61812 414 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 ARHGAP15Q53QZ3 475 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 MTFR1LQ9H019 292 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 DOLKQ9UPQ8 538 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 DNAJC8O75937 253 aaPredicted RBP21.28■■□□□ 1
CTDP1-208ENST00000613122 SKIP12755 728 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 RPS6P62753 249 aaKnown RBP21.28■■□□□ 1
CTDP1-208ENST00000613122 RASIP1Q5U651 963 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 COL23A1Q86Y22 540 aaPredicted RBP21.28■■□□□ 1
CTDP1-208ENST00000613122 ANKEF1Q9NU02 776 aa21.28■■□□□ 1
CTDP1-208ENST00000613122 EPHX2P34913 555 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 SLC26A7Q8TE54 656 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 THOC1Q96FV9 657 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 E2F6O75461 281 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 PYGBP11216 843 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 DDX5P17844 614 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 THPOP40225 353 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 PPP4R4Q6NUP7 873 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 HNRNPCL2B2RXH8 293 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 EEF2KO00418 725 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 HNRNPCL1O60812 293 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 ICAM1P05362 532 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 SNRPFP62306 86 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 PXDNLA1KZ92 1463 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 ABCA9Q8IUA7 1624 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 MAP4P27816 1152 aaKnown RBP21.27■■□□□ 1
CTDP1-208ENST00000613122 CAP2P40123 477 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 DEUP1Q05D60 604 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 TEKT4Q8WW24 435 aa21.27■■□□□ 1
CTDP1-208ENST00000613122 EXTL3O43909 919 aa21.27■□□□□ 0.99
CTDP1-208ENST00000613122 ALDH7A1P49419 539 aaKnown RBP21.27■□□□□ 0.99
CTDP1-208ENST00000613122 ERO1BQ86YB8 467 aa21.27■□□□□ 0.99
CTDP1-208ENST00000613122 ELAC2Q9BQ52 826 aaKnown RBP21.27■□□□□ 0.99
CTDP1-208ENST00000613122 INTUQ9ULD6 942 aa21.27■□□□□ 0.99
CTDP1-208ENST00000613122 ANKS3Q6ZW76 656 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 SLC30A5Q8TAD4 765 aa21.26■□□□□ 0.99
CTDP1-208ENST00000613122 FAM49BQ9NUQ9 324 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms