RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ATP6V1E1P36543 226 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 MYBPC3Q14896 1274 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ARMCX4Q5H9R4 360 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF589Q86UQ0 364 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 LRRC20Q8TCA0 184 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PGBD1Q96JS3 809 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TIPINQ9BVW5 301 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 COG4Q9H9E3 785 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NLRC4Q9NPP4 1024 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NMRK1Q9NWW6 199 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SNX24Q9Y343 169 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CDK12Q9NYV4 1490 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ZBTB39O15060 712 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CDK7P50613 346 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 KDSRQ06136 332 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 FUCA2Q9BTY2 467 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PDCD10Q9BUL8 212 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 MRPL9Q9BYD2 267 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PCMTD2Q9NV79 361 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PLK2Q9NYY3 685 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 MAPK8IP1Q9UQF2 711 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CYP2C9P11712 490 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 HOXB6P17509 224 aaKnown RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 WDR44Q5JSH3 913 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SULT6B1Q6IMI4 303 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GPBP1Q86WP2 473 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 MICU2Q8IYU8 434 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 KCTD4Q8WVF5 259 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 CDKL2Q92772 493 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SPATA31E1Q6ZUB1 1445 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 SMCO2A6NFE2 343 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 F8W8V4 182 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 FAM13AO94988 1023 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 TRAPPC10P48553 1259 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GSSP48637 474 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RUNX1T1Q06455 604 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 AASDHQ4L235 1098 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ECSITQ9BQ95 431 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NSMCE4AQ9NXX6 385 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 ABCA6Q8N139 1617 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 VCLP18206 1134 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 PHC1P78364 1004 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 GIMAP8Q8ND71 665 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-213ENST00000613099 NPHS2Q9NP85 383 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RAB20Q9NX57 234 aa5.21□□□□□ -1.58
VPS13D-213ENST00000613099 RTL9Q8NET4 1388 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 DAPK3O43293 454 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 NBNO60934 754 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 UNC5CO95185 931 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 MYBL1P10243 752 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 GPD2P43304 727 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 CCR3P51677 355 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SPANXN2Q5MJ10 180 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SLC10A5Q5PT55 438 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 PDIK1LQ8N165 341 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SMARCAD1Q9H4L7 1026 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ZMAT5Q9UDW3 170 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 GSTA4O15217 222 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SULT1B1O43704 296 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 IREB2P48200 963 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 PUDPQ08623 228 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 OASLQ15646 514 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ZFP69Q49AA0 526 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 MANSC1Q9H8J5 431 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ADA2Q9NZK5 511 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 THOP1P52888 689 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 FAM89AQ96GI7 184 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 NCOA5Q9HCD5 579 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ATP10BO94823 1461 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 COPEO14579 308 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 PCNAP12004 261 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 IGBP1P78318 339 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 HABP4Q5JVS0 413 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 C6orf10Q5SRN2 563 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 RINT1Q6NUQ1 792 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 AGAP3Q96P47 875 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 RBM12Q9NTZ6 932 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 UBA2Q9UBT2 640 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 GNPTGQ9UJJ9 305 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 TMCC3Q9ULS5 477 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SLC12A4Q9UP95 1085 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ZMYM6O95789 1325 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF233A6NK53 670 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 PDZK1P1A8MUH7 402 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 KRT36O76013 467 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 RAB25P57735 213 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 MAPRE2Q15555 327 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF658Q5TYW1 1059 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 CCDC28AQ8IWP9 274 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 GOLM1Q8NBJ4 401 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 NGDNQ8NEJ9 315 aaKnown RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 SHCBP1Q8NEM2 672 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 PGM2Q96G03 612 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 FOXP1Q9H334 677 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-213ENST00000613099 GINM1Q9NU53 330 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 BCORL1Q5H9F3 1711 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 F6X3S4 739 aa5.2□□□□□ -1.58
VPS13D-213ENST00000613099 LZTS3O60299 673 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms