RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ELSPBP1Q96BH3 223 aa19.02■□□□□ 0.64
CSNK1E-215ENST00000612795 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.64
CSNK1E-215ENST00000612795 IER2Q9BTL4 223 aa19.02■□□□□ 0.64
CSNK1E-215ENST00000612795 CHRDQ9H2X0 955 aa19.02■□□□□ 0.64
CSNK1E-215ENST00000612795 ANKEF1Q9NU02 776 aa19.02■□□□□ 0.64
CSNK1E-215ENST00000612795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 SLC30A4O14863 429 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 USO1O60763 962 aaKnown RBP19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 LRG1P02750 347 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 XBP1P17861 261 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 CCR3P51677 355 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 STK3Q13188 491 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 FZD5Q13467 585 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 TANGO2Q6ICL3 276 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 CELF5Q8N6W0 485 aaKnown RBP19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 ADPGKQ9BRR6 497 aa19.01■□□□□ 0.63
CSNK1E-215ENST00000612795 GREB1Q4ZG55 1949 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 LRP3O75074 770 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 LYPLA2O95372 231 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 TDGF1P13385 188 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 FGFR3P22607 806 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 RARRES1P49788 294 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 TOB2Q14106 344 aaPredicted RBP19■□□□□ 0.63
CSNK1E-215ENST00000612795 MAEAQ7L5Y9 396 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 TRMT61BQ9BVS5 477 aaKnown RBP19■□□□□ 0.63
CSNK1E-215ENST00000612795 PDZD7Q9H5P4 517 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 ZFP14Q9HCL3 533 aa19■□□□□ 0.63
CSNK1E-215ENST00000612795 PRRG1O14668 218 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 B3GAT3O94766 335 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 RETP07949 1114 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 PTPN2P17706 415 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 ELF1P32519 619 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 NAB2Q15742 525 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 ANKS3Q6ZW76 656 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 IRF7Q92985 503 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 CORO1BQ9BR76 489 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 GPRC5CQ9NQ84 441 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 AVENQ9NQS1 362 aaPredicted RBP18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 PCDHA12Q9UN75 941 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 GDAQ9Y2T3 454 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 USP24Q9UPU5 2620 aa18.99■□□□□ 0.63
CSNK1E-215ENST00000612795 CITO14578 2027 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 SHISA7A6NL88 538 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 TMEM189-UBE2V1I3L0A0 370 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 FCARP24071 287 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 TKTP29401 623 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 PRPF4BQ13523 1007 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 SIM2Q14190 667 aaPredicted RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 GLRA4Q5JXX5 417 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 CDCA2Q69YH5 1023 aaPredicted RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 PRR23CQ6ZRP0 262 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 PIGOQ8TEQ8 1089 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 FAM3CQ92520 227 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 ZNF274Q96GC6 653 aaPredicted RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 DDX27Q96GQ7 796 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 LARP6Q9BRS8 491 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 C2orf40Q9H1Z8 148 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 CXCL16Q9H2A7 254 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 LMAN1LQ9HAT1 526 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 SEMA4GQ9NTN9 838 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 BACE2Q9Y5Z0 518 aa18.98■□□□□ 0.63
CSNK1E-215ENST00000612795 TRAPPC3O43617 180 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 CDKL5O76039 1030 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 LIG1P18858 919 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 CLCNKBP51801 687 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 ROR1Q01973 937 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 MAPK6Q16659 721 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 FAM78AQ5JUQ0 283 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 PDZD4Q76G19 769 aaPredicted RBP18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 ZNF687Q8N1G0 1237 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 MCPH1Q8NEM0 835 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 OXER1Q8TDS5 423 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 HSD17B14Q9BPX1 270 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 FZD8Q9H461 694 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 PIAS3Q9Y6X2 628 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 SPAG17Q6Q759 2223 aa18.97■□□□□ 0.63
CSNK1E-215ENST00000612795 ARHGEF37A1IGU5 675 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 TTLL13PA6NNM8 815 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 I3L4J1 428 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 ZNF197O14709 1029 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 PRKCBP05771 671 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 GDI1P31150 447 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 CXCL12P48061 93 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 SATB1Q01826 763 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 CALCRLQ16602 461 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 PRSS36Q5K4E3 855 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 POTEHQ6S545 545 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 MAMSTRQ6ZN01 415 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 TCEAL4Q96EI5 215 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 UROC1Q96N76 676 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 ZNF334Q9HCZ1 680 aaPredicted RBP18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
CSNK1E-215ENST00000612795 A0A087WWV3 80 aa18.95■□□□□ 0.62
CSNK1E-215ENST00000612795 PSMC3P17980 439 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms