RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 PAGR1Q9BTK6 254 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 FAM114A2Q9NRY5 505 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 CHST7Q9NS84 486 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 C1orf112Q9NSG2 853 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 GTF3C4Q9UKN8 822 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 AFG3L2Q9Y4W6 797 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 MYPNQ86TC9 1320 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 GJB1P08034 283 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 VPS41P49754 854 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 TMEM270Q6UE05 265 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 MOB2Q70IA6 237 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 FOXO6A8MYZ6 492 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 SCP2P22307 547 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 UBA1P22314 1058 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 CTNNA2P26232 953 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 MAPK4P31152 587 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 MDH1P40925 334 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 IFFO1Q0D2I5 559 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 VGLL4Q14135 290 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 LY6KQ17RY6 165 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 ZNF394Q53GI3 561 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 XKR3Q5GH77 459 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 ANKS1BQ7Z6G8 1248 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 PSPC1Q8WXF1 523 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 RAB17Q9H0T7 212 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 RBAKQ9NYW8 714 aaPredicted RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 USTQ9Y2C2 406 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 MIF4GDA9UHW6 222 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 K7ERI5 159 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 EXTL3O43909 919 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 C4BPAP04003 597 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 OATP04181 439 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 PGK2P07205 417 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 UNGP13051 313 aaPredicted RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 GNPTABQ3T906 1256 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 FMNL3Q8IVF7 1028 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 RDM1Q8NG50 284 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 DEPTORQ8TB45 409 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 TXLNGYQ9BZA5 131 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 R3HDM2Q9Y2K5 976 aaKnown RBP15.07■□□□□ 0
PCDHGA3-202ENST00000612467 NUB1Q9Y5A7 615 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 PCDHA3Q9Y5H8 950 aa15.07■□□□□ 0
PCDHGA3-202ENST00000612467 HMGB1P1B2RPK0 211 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 E7EVH7 732 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 USP2O75604 605 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 TCF4P15884 667 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 SNRPFP62306 86 aaKnown RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 SLC29A2Q14542 456 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 STXBP2Q15833 593 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 ZACNQ401N2 412 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 NCAPG2Q86XI2 1143 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 MCOLN2Q8IZK6 566 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 LRRC71Q8N4P6 559 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 C12orf42Q96LP6 360 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 RPS6KC1Q96S38 1066 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 MSTO1Q9BUK6 570 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 PNMA2Q9UL42 364 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 FAM169AQ9Y6X4 670 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 GSTTP1A0A1W2PQM5 241 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 ADM5C9JUS6 153 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 PMM2O15305 246 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 MAFGO15525 162 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 PPFIA2O75334 1257 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 CST3P01034 146 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 GARTP22102 1010 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 COILP38432 576 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 STRN3Q13033 797 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 PTGISQ16647 500 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 TRAPPC12Q8WVT3 735 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
PCDHGA3-202ENST00000612467 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 PCDHB4Q9Y5E5 795 aa15.06■□□□□ 0
PCDHGA3-202ENST00000612467 SOWAHBA6NEL2 793 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 CD58P19256 250 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 PMS2P54278 862 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 OSTNP61366 133 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 CAPSQ13938 189 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 ATP13A4Q4VNC1 1196 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 XRRA1Q6P2D8 792 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 LRIG3Q6UXM1 1119 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 EPS8L3Q8TE67 593 aaKnown RBP15.05■□□□□ 0
PCDHGA3-202ENST00000612467 ACSF2Q96CM8 615 aaPredicted RBP15.05■□□□□ 0
PCDHGA3-202ENST00000612467 HVCN1Q96D96 273 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 PORCNQ9H237 461 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 DIS3Q9Y2L1 958 aaKnown RBP15.05■□□□□ 0
PCDHGA3-202ENST00000612467 MAFBQ9Y5Q3 323 aaPredicted RBP15.05■□□□□ 0
PCDHGA3-202ENST00000612467 SNCAIPQ9Y6H5 919 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 NFASCO94856 1347 aa15.05■□□□□ 0
PCDHGA3-202ENST00000612467 EBAG9O00559 213 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 MTA2O94776 668 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 ARIH2O95376 493 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 SRGAP2CP0DJJ0 459 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 ACO1P21399 889 aaKnown RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 SSR1P43307 286 aaKnown RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 LIG3P49916 1009 aa15.05■□□□□ -0
PCDHGA3-202ENST00000612467 ALDH5A1P51649 535 aaPredicted RBP15.05■□□□□ -0
PCDHGA3-202ENST00000612467 RWDD2BP57060 319 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms