RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
LINC00116-203ENST00000611969 PPME1Q9Y570 386 aa15.23■□□□□ 0.03
LINC00116-203ENST00000611969 SPAG17Q6Q759 2223 aa15.23■□□□□ 0.03
LINC00116-203ENST00000611969 KIF26AQ9ULI4 1882 aaPredicted RBP15.23■□□□□ 0.03
LINC00116-203ENST00000611969 CHURC1-FNTBB4DL54 471 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 HRO43593 1189 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 DKC1O60832 514 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 OR1D2P34982 312 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 FNTBP49356 437 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 NRLP54845 237 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 RAB33AQ14088 237 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 SIM2Q14190 667 aaPredicted RBP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 GAS6Q14393 721 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 PCBP1Q15365 356 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 NPY5RQ15761 445 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 SLC27A1Q6PCB7 646 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 NEK8Q86SG6 692 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 ELSPBP1Q96BH3 223 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 BRMS1Q9HCU9 246 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
LINC00116-203ENST00000611969 LAMA1P25391 3075 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 EML5Q05BV3 1969 aa15.22■□□□□ 0.03
LINC00116-203ENST00000611969 NCANO14594 1321 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 TBX3O15119 743 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 ASAP2O43150 1006 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 P4HBP07237 508 aaKnown RBP15.21■□□□□ 0.03
LINC00116-203ENST00000611969 HOXC13P31276 330 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 CCR3P51677 355 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 NEK4P51957 841 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 CYP4A11Q02928 519 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 CTTNQ14247 550 aaKnown RBP15.21■□□□□ 0.03
LINC00116-203ENST00000611969 NAB2Q15742 525 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 INF2Q27J81 1249 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 C4orf19Q8IY42 314 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 TCEAL4Q96EI5 215 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 AIFM3Q96NN9 605 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 BRD9Q9H8M2 597 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 LMAN1LQ9HAT1 526 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 KCNMB3Q9NPA1 279 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 GDE1Q9NZC3 331 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 MTRRQ9UBK8 725 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 CDY1Q9Y6F8 540 aa15.21■□□□□ 0.03
LINC00116-203ENST00000611969 GLRA2P23416 452 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 TFDP1Q14186 410 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 MXD4Q14582 209 aaPredicted RBP15.2■□□□□ 0.02
LINC00116-203ENST00000611969 FAM78AQ5JUQ0 283 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
LINC00116-203ENST00000611969 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 FAM3CQ92520 227 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 RXFP3Q9NSD7 469 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 PIAS3Q9Y6X2 628 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
LINC00116-203ENST00000611969 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 MAN2B1O00754 1011 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 MARCH6O60337 910 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 FGFR3P22607 806 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 CCR2P41597 374 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 SHC2P98077 582 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 PPP2R5DQ14738 602 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 SF3A2Q15428 464 aaKnown RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 CCDC6Q16204 474 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 WDR44Q5JSH3 913 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 HEATR6Q6AI08 1181 aaKnown RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 NCAPH2Q6IBW4 605 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 FAM160A2Q8N612 972 aaPredicted RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 HAS1Q92839 578 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 GTF3C6Q969F1 213 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 RBM12Q9NTZ6 932 aaKnown RBP15.19■□□□□ 0.02
LINC00116-203ENST00000611969 C2orf42Q9NWW7 574 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 ASPMQ8IZT6 3477 aa15.19■□□□□ 0.02
LINC00116-203ENST00000611969 I3L4J1 428 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 K7ESF4 209 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 CCNT1O60563 726 aaKnown RBP15.18■□□□□ 0.02
LINC00116-203ENST00000611969 RECQL4O94761 1208 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 CHRNB1P11230 501 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
LINC00116-203ENST00000611969 GDI1P31150 447 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 ARL2P36404 184 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 CXCL12P48061 93 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 EPHA7Q15375 998 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 ME3Q16798 604 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 IL31Q6EBC2 164 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 PDXDC1Q6P996 788 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 VITQ6UXI7 678 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 Q6ZS52 159 aa15.18■□□□□ 0.02
LINC00116-203ENST00000611969 OTUD6AQ7L8S5 288 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms