RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SOX4Q06945 474 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-226ENST00000611736 SLFN12LQ6IEE8 588 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 LLGL2Q6P1M3 1020 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 UNC13DQ70J99 1090 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 SYCP3Q8IZU3 236 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 PAGE5Q96GU1 130 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 GOLPH3LQ9H4A5 285 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 SLC38A7Q9NVC3 462 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 USP25Q9UHP3 1055 aa28.37■■■□□ 2.13
VEGFA-226ENST00000611736 BARX2Q9UMQ3 279 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-226ENST00000611736 PDCD11Q14690 1871 aaKnown RBP28.37■■■□□ 2.13
VEGFA-226ENST00000611736 CLASP2O75122 1294 aaKnown RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 EFEMP2O95967 443 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 ENOX2Q16206 610 aaKnown RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 FAM26FQ5R3K3 315 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 RNF168Q8IYW5 571 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 POMGNT1Q8WZA1 660 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 C18orf25Q96B23 403 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 B3GALT6Q96L58 329 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 RPF1Q9H9Y2 349 aaKnown RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 MRPL17Q9NRX2 175 aaKnown RBP28.36■■■□□ 2.13
VEGFA-226ENST00000611736 IRAK3Q9Y616 596 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 STYXL1Q9Y6J8 313 aa28.36■■■□□ 2.13
VEGFA-226ENST00000611736 C5orf42Q9H799 3197 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 FAM237AA0A1B0GTK4 181 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 FSD2A1L4K1 749 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 BMP1P13497 986 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 GLUD2P49448 558 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 CLCNKBP51801 687 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 SPAG1Q07617 926 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 STXBP4Q6ZWJ1 553 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 UROC1Q96N76 676 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 PLEKHA5Q9HAU0 1116 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 CLEC1BQ9P126 229 aa28.35■■■□□ 2.13
VEGFA-226ENST00000611736 AGO2Q9UKV8 859 aaKnown RBP28.35■■■□□ 2.13
VEGFA-226ENST00000611736 SF3B1O75533 1304 aaKnown RBP eCLIP28.35■■■□□ 2.136e-7■■■■■ 31.1
VEGFA-226ENST00000611736 TTC26A0AVF1 554 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 ADSSP30520 456 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 ACOT2P49753 483 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 PPP2R3AQ06190 1150 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 KIAA1841Q6NSI8 718 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 FAM212AQ96EL1 285 aa28.34■■■□□ 2.13
VEGFA-226ENST00000611736 CPSF3Q9UKF6 684 aaKnown RBP28.34■■■□□ 2.13
VEGFA-226ENST00000611736 CIZ1Q9ULV3 898 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-226ENST00000611736 LACTBL1A8MY62 500 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 B3GAT3O94766 335 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 IGFBP6P24592 240 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-226ENST00000611736 POSTNQ15063 836 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 UPP1Q16831 310 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 USP41Q3LFD5 358 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 PTCRAQ6ISU1 281 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-226ENST00000611736 DCLRE1AQ6PJP8 1040 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 KIF12Q96FN5 646 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 EMILIN2Q9BXX0 1053 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 TMEM206Q9H813 350 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 CD207Q9UJ71 328 aa28.33■■■□□ 2.13
VEGFA-226ENST00000611736 PVALEFA0A1B0GWK0 134 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 LILRB3O75022 631 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 CNPP09543 421 aaKnown RBP28.32■■■□□ 2.12
VEGFA-226ENST00000611736 SRGAP2BP0DMP2 458 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 DSG1Q02413 1049 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 KCNC3Q14003 757 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 KIAA0319Q5VV43 1072 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 ADAMTS19Q8TE59 1207 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 TUBGCP4Q9UGJ1 667 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 SSX2IPQ9Y2D8 614 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 HCFC2Q9Y5Z7 792 aa28.32■■■□□ 2.12
VEGFA-226ENST00000611736 GOLGA6L4A6NEF3 574 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 PODXLO00592 558 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 EHHADHQ08426 723 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 FAM171A1Q5VUB5 890 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 TMEM130Q8N3G9 435 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 C3orf58Q8NDZ4 430 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 RIN2Q8WYP3 895 aaPredicted RBP28.31■■■□□ 2.12
VEGFA-226ENST00000611736 DDX27Q96GQ7 796 aaKnown RBP28.31■■■□□ 2.12
VEGFA-226ENST00000611736 MSLNLQ96KJ4 702 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 KLHL5Q96PQ7 755 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 CHST7Q9NS84 486 aa28.31■■■□□ 2.12
VEGFA-226ENST00000611736 TMEM189-UBE2V1I3L0A0 370 aa28.3■■■□□ 2.12
VEGFA-226ENST00000611736 EIF3DO15371 548 aaKnown RBP eCLIP28.3■■■□□ 2.12
VEGFA-226ENST00000611736 KLRC2P26717 231 aa28.3■■■□□ 2.12
VEGFA-226ENST00000611736 EPM2AIP1Q7L775 607 aaPredicted RBP28.3■■■□□ 2.12
VEGFA-226ENST00000611736 CEP57Q86XR8 500 aa28.3■■■□□ 2.12
VEGFA-226ENST00000611736 SAAL1Q96ER3 474 aa28.3■■■□□ 2.12
VEGFA-226ENST00000611736 SLC39A2Q9NP94 309 aa28.3■■■□□ 2.12
VEGFA-226ENST00000611736 ANK1P16157 1881 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 BDP1A6H8Y1 2624 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 GRXCR2A6NFK2 248 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 KLRC4O43908 158 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 ZNF202O95125 648 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 IL9P15248 144 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 HOXD13P35453 343 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 ELAVL2Q12926 359 aaKnown RBP28.29■■■□□ 2.12
VEGFA-226ENST00000611736 PUS10Q3MIT2 529 aaKnown RBP28.29■■■□□ 2.12
VEGFA-226ENST00000611736 RTP2Q5QGT7 225 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 CD300LGQ6UXG3 332 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 TMEM184AQ6ZMB5 413 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 ZSWIM2Q8NEG5 633 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 CASP10Q92851 521 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms