RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 POF1BQ8WVV4 589 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 MYLIPQ8WY64 445 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 IGSF21Q96ID5 467 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 FBXL18Q96ME1 805 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 ALG13Q9NP73 1137 aaKnown RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 PRG3Q9Y2Y8 225 aaPredicted RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 C2CD2Q9Y426 696 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 GBF1Q92538 1859 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 CASTOR2A6NHX0 329 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 TULP1O00294 542 aaPredicted RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 PSMA7O14818 248 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 GRM6O15303 877 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 MEFVO15553 781 aaPredicted RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 B4GALT3O60512 393 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 EXOC3O60645 756 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 LPXNO60711 386 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 TADA2AO75478 443 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 CYP3A5P20815 502 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 RPL9P32969 192 aaKnown RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 PRCPP42785 496 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 MORC3Q14149 939 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 NAB2Q15742 525 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 SNRNP35Q16560 246 aaKnown RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 NFIL3Q16649 462 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 PDE12Q6L8Q7 609 aaKnown RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 BEST2Q8NFU1 509 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 MRPL38Q96DV4 380 aaKnown RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 TSG101Q99816 390 aa15.48■□□□□ 0.07
CTSA-219ENST00000607841 FNDC1Q4ZHG4 1894 aaPredicted RBP15.48■□□□□ 0.07
CTSA-219ENST00000607841 BIN1O00499 593 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 NR3C1P04150 777 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 SPAG1Q07617 926 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 ADGRE1Q14246 886 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 ZBTB6Q15916 424 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 EDRF1Q3B7T1 1238 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 DCLRE1AQ6PJP8 1040 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 DDX53Q86TM3 631 aaKnown RBP15.47■□□□□ 0.07
CTSA-219ENST00000607841 CBWD2Q8IUF1 395 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 RDH13Q8NBN7 331 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 MICAL1Q8TDZ2 1067 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 CACTINQ8WUQ7 758 aaKnown RBP15.47■□□□□ 0.07
CTSA-219ENST00000607841 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
CTSA-219ENST00000607841 TLR9Q9NR96 1032 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 DMAC2Q9NW81 257 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 FRMD4BQ9Y2L6 1034 aa15.47■□□□□ 0.07
CTSA-219ENST00000607841 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 B3GAT3O94766 335 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 NR2F2P24468 414 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 CLCNKBP51801 687 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 UPP1Q16831 310 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 TIGD5Q53EQ6 642 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 SPATA1Q5VX52 437 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 JADE1Q6IE81 842 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 CENPPQ6IPU0 288 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 TMEM173Q86WV6 379 aaPredicted RBP15.46■□□□□ 0.07
CTSA-219ENST00000607841 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 C18orf25Q96B23 403 aaPredicted RBP15.46■□□□□ 0.07
CTSA-219ENST00000607841 FNBP1Q96RU3 617 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 NGRNQ9NPE2 291 aaKnown RBP15.46■□□□□ 0.07
CTSA-219ENST00000607841 MARCH5Q9NX47 278 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 ADAM28Q9UKQ2 775 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 MTCH2Q9Y6C9 303 aa15.46■□□□□ 0.07
CTSA-219ENST00000607841 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTSA-219ENST00000607841 PODXLO00592 558 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 NFICP08651 508 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 LRPAP1P30533 357 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 SOX4Q06945 474 aaPredicted RBP15.45■□□□□ 0.06
CTSA-219ENST00000607841 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
CTSA-219ENST00000607841 ADAM9Q13443 819 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 TMC7Q7Z402 723 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 USP37Q86T82 979 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 VPS52Q8N1B4 723 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 TCF25Q9BQ70 676 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 ENTPD7Q9NQZ7 604 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
CTSA-219ENST00000607841 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 CETN3O15182 167 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 MAPK13O15264 365 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 KIF4AO95239 1232 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 SOD2P04179 222 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 BMP6P22004 513 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 PAX3P23760 479 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 CCNE1P24864 410 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 DNAJB1P25685 340 aa15.44■□□□□ 0.06
CTSA-219ENST00000607841 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms