RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 SNRNP35Q16560 246 aaKnown RBP17.02■□□□□ 0.32
LINC00221-201ENST00000603633 ISM2Q6H9L7 571 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 CENPPQ6IPU0 288 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 FOXR2Q6PJQ5 311 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 BEST2Q8NFU1 509 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 IGSF21Q96ID5 467 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
LINC00221-201ENST00000603633 PRDM12Q9H4Q4 367 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 FRMD4BQ9Y2L6 1034 aa17.02■□□□□ 0.32
LINC00221-201ENST00000603633 BICDL2A1A5D9 508 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 ITGB1P05556 798 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 TMEM132DQ14C87 1099 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 NAB2Q15742 525 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 ZBTB6Q15916 424 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CCDC183Q5T5S1 534 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 DCLRE1AQ6PJP8 1040 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 Q7L0L9 218 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 USP37Q86T82 979 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 MLKLQ8NB16 471 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 SPPL3Q8TCT6 385 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 MAPK13O15264 365 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 MEFVO15553 781 aaPredicted RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 TADA2AO75478 443 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 PAX3P23760 479 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 NR2F2P24468 414 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CCNE1P24864 410 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CBWD2Q8IUF1 395 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 FNBP1Q96RU3 617 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
LINC00221-201ENST00000603633 PRG3Q9Y2Y8 225 aaPredicted RBP17.01■□□□□ 0.31
LINC00221-201ENST00000603633 EPOPA6NHQ4 379 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 NT5C1B-RDH14C9J2C7 533 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 CETN3O15182 167 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 B4GALT3O60512 393 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 PBX3P40426 434 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
LINC00221-201ENST00000603633 ADAM9Q13443 819 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 SPATA1Q5VX52 437 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 JADE1Q6IE81 842 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 DDX53Q86TM3 631 aaKnown RBP17■□□□□ 0.31
LINC00221-201ENST00000603633 RDH13Q8NBN7 331 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 GDPD5Q8WTR4 605 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 POF1BQ8WVV4 589 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 MRPL38Q96DV4 380 aaKnown RBP17■□□□□ 0.31
LINC00221-201ENST00000603633 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
LINC00221-201ENST00000603633 ALG13Q9NP73 1137 aaKnown RBP17■□□□□ 0.31
LINC00221-201ENST00000603633 PPP1R3GB7ZBB8 358 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 TRAPPC3O43617 180 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 B3GAT3O94766 335 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 BMP6P22004 513 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 LRPAP1P30533 357 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 PSMC2P35998 433 aaKnown RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 CYP24A1Q07973 514 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 PSMD6Q15008 389 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 UPP1Q16831 310 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 KLHL40Q2TBA0 621 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 CT47A1Q5JQC4 288 aaPredicted RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 RBM43Q6ZSC3 357 aaKnown RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 ZSWIM2Q8NEG5 633 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 MFSD14AQ96MC6 490 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 NGRNQ9NPE2 291 aaKnown RBP16.99■□□□□ 0.31
LINC00221-201ENST00000603633 ADAM28Q9UKQ2 775 aa16.99■□□□□ 0.31
LINC00221-201ENST00000603633 RFXAPO00287 272 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 GRM6O15303 877 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 LPXNO60711 386 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 AP3M2P53677 418 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 ENPEPQ07075 957 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 SPAG1Q07617 926 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 PAK1Q13153 545 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 KLHL10Q6JEL2 608 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 NELFBQ8WX92 580 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 PPP2R3CQ969Q6 453 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 C18orf25Q96B23 403 aaPredicted RBP16.98■□□□□ 0.31
LINC00221-201ENST00000603633 GUCD1Q96NT3 240 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 MKNK1Q9BUB5 465 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 TLR9Q9NR96 1032 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 SSX2IPQ9Y2D8 614 aa16.98■□□□□ 0.31
LINC00221-201ENST00000603633 SF3B1O75533 1304 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00221-201ENST00000603633 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
LINC00221-201ENST00000603633 PODXLO00592 558 aa16.97■□□□□ 0.31
LINC00221-201ENST00000603633 FGFR1OPO95684 399 aaKnown RBP16.97■□□□□ 0.31
LINC00221-201ENST00000603633 NFICP08651 508 aa16.97■□□□□ 0.31
LINC00221-201ENST00000603633 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
LINC00221-201ENST00000603633 IGFBP4P22692 258 aa16.97■□□□□ 0.31
LINC00221-201ENST00000603633 CLCNKBP51801 687 aa16.97■□□□□ 0.31
LINC00221-201ENST00000603633 NLRP12P59046 1061 aa16.97■□□□□ 0.31
LINC00221-201ENST00000603633 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
LINC00221-201ENST00000603633 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
LINC00221-201ENST00000603633 DUOXA2Q1HG44 320 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms