RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 NGRNQ9NPE2 291 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 UBQLN1Q9UMX0 589 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 ATG2AQ2TAZ0 1938 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 HOXD13P35453 343 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 VPS52Q8N1B4 723 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 TCF25Q9BQ70 676 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 AGPAT3Q9NRZ7 376 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 HSPBP1Q9NZL4 362 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 ADAM28Q9UKQ2 775 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 SSX2IPQ9Y2D8 614 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 DERAQ9Y315 318 aa17.4■□□□□ 0.38
PPFIA3-213ENST00000602905 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 GOLGA8IPA6NC78 632 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 ZNF233A6NK53 670 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 GOLGA8JA6NMD2 632 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 CLIC2O15247 247 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 TGFB1I1O43294 461 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 DNAJB1P25685 340 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 RPL9P32969 192 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 ELAVL2Q12926 359 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 TMEM132DQ14C87 1099 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 SURF1Q15526 300 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 NAB2Q15742 525 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 ZNF658Q5TYW1 1059 aaPredicted RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 PLPP4Q5VZY2 271 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 DCLRE1AQ6PJP8 1040 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 TMEM173Q86WV6 379 aaPredicted RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 GUF1Q8N442 669 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 ZMAT2Q96NC0 199 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 MARCH5Q9NX47 278 aa17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 RBAKQ9NYW8 714 aaPredicted RBP17.39■□□□□ 0.37
PPFIA3-213ENST00000602905 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.377e-16■■■■■ 189.5
PPFIA3-213ENST00000602905 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 PDXKO00764 312 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 NCK2O43639 380 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 B3GAT3O94766 335 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 ADRB2P07550 413 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CYP3A5P20815 502 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CYP2J2P51589 502 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CLCNKBP51801 687 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 ERVFC1P60507 584 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 SPAG1Q07617 926 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 STIM1Q13586 685 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CAMK1Q14012 370 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 TCEAL5Q5H9L2 206 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 JADE1Q6IE81 842 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 KIAA1841Q6NSI8 718 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 FUT10Q6P4F1 479 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CRELD2Q6UXH1 353 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 NT5DC4Q86YG4 428 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 BRSK2Q8IWQ3 736 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 C12orf56Q8IXR9 622 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 CACTINQ8WUQ7 758 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 C18orf25Q96B23 403 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
PPFIA3-213ENST00000602905 TMEM189-UBE2V1I3L0A0 370 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 PODXLO00592 558 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 FSCN2O14926 492 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 EXOC3O60645 756 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 CXCL14O95715 111 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 SOD2P04179 222 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 URODP06132 367 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 CTSAP10619 480 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 IRS1P35568 1242 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 PPP1R2P41236 205 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 UPP1Q16831 310 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 HASPINQ8TF76 798 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 BCL7CQ8WUZ0 217 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 PAAF1Q9BRP4 392 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 HERC2P3Q9BVR0 1158 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 ZBP1Q9H171 429 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 TLE6Q9H808 572 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 GOLGA2P5Q9HBQ8 144 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 MRPL17Q9NRX2 175 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 LMBRD1Q9NUN5 540 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 CACNG4Q9UBN1 327 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 C2CD2Q9Y426 696 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
PPFIA3-213ENST00000602905 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 KIF4AO95239 1232 aa17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 RPL13P26373 211 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 SOX4Q06945 474 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 MYBPC2Q14324 1141 aa17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 SNRNP35Q16560 246 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 CAMK4Q16566 473 aa17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 USP41Q3LFD5 358 aa17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 RDH13Q8NBN7 331 aa17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-213ENST00000602905 TSG101Q99816 390 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms