RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CLK1P49759 484 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 KCNQ4P56696 695 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 GLYCTKQ8IVS8 523 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 C17orf80Q9BSJ5 609 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PPCSQ9HAB8 311 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF185O15231 689 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ARHGEF6Q15052 776 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PRPF39Q86UA1 669 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TTC30AQ86WT1 665 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC103Q8IW40 242 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 THTPAQ9BU02 230 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 MTO1Q9Y2Z2 717 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PVALEFA0A1B0GWK0 134 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RSPH10B2B2RC85 870 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RAD17O75943 681 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RSPH10BP0C881 870 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ENO3P13929 434 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RPS6P62753 249 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CENPPQ6IPU0 288 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PCYOX1LQ8NBM8 494 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TLR2O60603 784 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TRMT2AQ8IZ69 625 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 OXER1Q8TDS5 423 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 BTN2A2Q8WVV5 523 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CNDP1Q96KN2 507 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PRKAG2Q9UGJ0 569 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 LIMA1Q9UHB6 759 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 AIM2O14862 343 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RTN2O75298 545 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RCAN1P53805 252 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ACTR2P61160 394 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 STX3Q13277 289 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 KIF2BQ8N4N8 673 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 A0A1W2PQC6 194 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L15C9J2P7 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L13C9JLJ4 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L11C9JVI0 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L18D6R9N7 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L22D6RA61 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L17D6RBQ6 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L19D6RCP7 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L20D6RJB6 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 GH2P01242 217 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L24Q0WX57 530 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L6PQ6QN14 398 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 KIRREL3Q8IZU9 778 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PLEKHA8Q96JA3 519 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 MRGBPQ9NV56 204 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ASAP1Q9ULH1 1129 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 HMOX2P30519 316 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 SLC1A1P43005 524 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 DGKHQ86XP1 1220 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TBC1D10CQ8IV04 446 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RCOR2Q8IZ40 523 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PCMTD2Q9NV79 361 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 XPO1O14980 1071 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 NBNO60934 754 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CDC27P30260 824 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 HORMAD1Q86X24 394 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 STRBPQ96SI9 672 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 BRD8Q9H0E9 1235 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 PIH1D3Q9NQM4 214 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 C20orf96Q9NUD7 363 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 ADCY10Q96PN6 1610 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 SLC44A4Q53GD3 710 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 PREX2Q70Z35 1606 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 PYGMP11217 842 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 MRPS35P82673 323 aaKnown RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 GPR162Q16538 588 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM16LQ309B1 348 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 LUZP2Q86TE4 346 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 RMDN1Q96DB5 314 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 LBHD1Q9BQE6 289 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CDY2AQ9Y6F7 541 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CDY1Q9Y6F8 540 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 KLHL2O95198 593 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CYP2C19P33261 490 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 RAB42Q8N4Z0 105 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 STMN3Q9NZ72 180 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CCT8L1PA6NM43 557 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 SLC16A3O15427 465 aaKnown RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 DLGAP3O95886 979 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 HSD17B4P51659 736 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 BTKQ06187 659 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF302Q9NR11 478 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 RHBDL2Q9NX52 303 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 SUPT3HB4E1H0 165 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 MYL3P08590 195 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms