RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 DCLRE1AQ6PJP8 1040 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ZNF720Q7Z2F6 126 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ADHFE1Q8IWW8 467 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 RNF168Q8IYW5 571 aaPredicted RBP17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 CEP57L1Q8IYX8 460 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 KIF12Q96FN5 646 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 DDX27Q96GQ7 796 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 CHAMP1Q96JM3 812 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 FBXL18Q96ME1 805 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 HAPLN2Q9GZV7 340 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ST6GALNAC4Q9H4F1 302 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 CUL9Q8IWT3 2517 aa17.3■□□□□ 0.36
PPFIA4-213ENST00000601609 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 GLUD1P00367 558 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 MYBP10242 640 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 KCNE1P15382 129 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 RPL17P18621 184 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 ZP2Q05996 745 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 SOX4Q06945 474 aaPredicted RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 ALCAMQ13740 583 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 RTP2Q5QGT7 225 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 L1TD1Q5T7N2 865 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 KIAA0319Q5VV43 1072 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 SYCE2Q6PIF2 218 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 PRSS55Q6UWB4 352 aaPredicted RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 ALKAL1Q6UXT8 129 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 STXBP4Q6ZWJ1 553 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 C12orf76Q8N812 135 aaPredicted RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 NOC3LQ8WTT2 800 aaKnown RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 SLC22A17Q8WUG5 538 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 POMGNT1Q8WZA1 660 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 KCNN1Q92952 543 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 C18orf25Q96B23 403 aaPredicted RBP17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 MAGEF1Q9HAY2 307 aa17.29■□□□□ 0.36
PPFIA4-213ENST00000601609 TTC28Q96AY4 2481 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 TISP43B9A030 160 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 I3L4J1 428 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 XPOTO43592 962 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 AFMP43652 599 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 CLCN4P51793 760 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 CBX2Q14781 532 aaPredicted RBP17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 PSMD5Q16401 504 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 UPP1Q16831 310 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 PALB2Q86YC2 1186 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 RPGRIP1Q96KN7 1286 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 TRIM9Q9C026 710 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 SFXN1Q9H9B4 322 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 PLEKHA5Q9HAU0 1116 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 MAN1C1Q9NR34 630 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 TSHZ2Q9NRE2 1034 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 CHST7Q9NS84 486 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 KBTBD4Q9NVX7 518 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
PPFIA4-213ENST00000601609 A0A0B4J269 797 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 LILRB3O75022 631 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 EFEMP2O95967 443 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 WEE2P0C1S8 567 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 SP100P23497 879 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 RPL9P32969 192 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 MCM4P33991 863 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 BRCC3P46736 316 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 ACOT2P49753 483 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 CASP5P51878 434 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 ITIH3Q06033 890 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 PDXDC1Q6P996 788 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 TMC5Q6UXY8 1006 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 RIPOR3Q96MK2 946 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 IKZF4Q9H2S9 585 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 DPP7Q9UHL4 492 aa17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-213ENST00000601609 A0A1B0GVL5 298 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms