RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TKTP29401 623 aaKnown RBP19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 GRM5P41594 1212 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 PEX3P56589 373 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 AXDND1Q5T1B0 1012 aaPredicted RBP19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 LIN9Q5TKA1 542 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 RINT1Q6NUQ1 792 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 C1orf186Q6ZWK4 172 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 KCNK18Q7Z418 384 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 FAM184AQ8NB25 1140 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 FGF13Q92913 245 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 UROC1Q96N76 676 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 ZMAT2Q96NC0 199 aaKnown RBP19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 RUSC1Q9BVN2 902 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 DNMT3BQ9UBC3 853 aaKnown RBP19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 STK24Q9Y6E0 443 aa19.77■□□□□ 0.76
CHMP2A-208ENST00000601220 I3L4J1 428 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 HIP1RO75146 1068 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 CDC25AP30304 524 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 BRCC3P46736 316 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 GPC5P78333 572 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 GNL2Q13823 731 aaKnown RBP19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 POTEHQ6S545 545 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 SLC7A14Q8TBB6 771 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 NKD2Q969F2 451 aaPredicted RBP19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 DDX27Q96GQ7 796 aaKnown RBP19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 NTPCRQ9BSD7 190 aaKnown RBP19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 ARHGEF3Q9NR81 526 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 HCFC1R1Q9NWW0 138 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 DNM3Q9UQ16 869 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 CDY1Q9Y6F8 540 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 PHLPP2Q6ZVD8 1323 aa19.76■□□□□ 0.75
CHMP2A-208ENST00000601220 VWA8A3KMH1 1905 aa19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 TBC1D4O60343 1298 aa19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 PRPHP41219 470 aa19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 RTL10Q7L3V2 364 aa19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 TARS2Q9BW92 718 aaKnown RBP19.75■□□□□ 0.75
CHMP2A-208ENST00000601220 VPS13AQ96RL7 3174 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 RIF1Q5UIP0 2472 aaKnown RBP19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 STK25O00506 426 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 LAD1O00515 517 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 XYLBO75191 536 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 GLULP15104 373 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 KCNE1P15382 129 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 STARD6P59095 220 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 OSTNP61366 133 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 SLC8B1Q6J4K2 584 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 ANKS3Q6ZW76 656 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 APBB1IPQ7Z5R6 666 aaPredicted RBP19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 SNX27Q96L92 541 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 MRPL4Q9BYD3 311 aaKnown RBP19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 RAB34Q9BZG1 259 aa19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 RBM19Q9Y4C8 960 aaKnown RBP19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 PTPRZ1P23471 2315 aaPredicted RBP19.74■□□□□ 0.75
CHMP2A-208ENST00000601220 SFI1A8K8P3 1242 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 TRAPPC3O43617 180 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 ABLIM3O94929 683 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 DCNP07585 359 aaKnown RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 MCF2P10911 925 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 DMP1Q13316 513 aaPredicted RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 MRPL58Q14197 206 aaKnown RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 ZNF568Q3ZCX4 644 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 HYIQ5T013 277 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 KRT79Q5XKE5 535 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 ZBTB45Q96K62 511 aaPredicted RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 PNMA5Q96PV4 448 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 DDX23Q9BUQ8 820 aaKnown RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 CCDC94Q9BW85 323 aaPredicted RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 C17orf75Q9HAS0 396 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 KMT5AQ9NQR1 393 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 TOPORSQ9NS56 1045 aaPredicted RBP19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 CNTN3Q9P232 1028 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 KCNH3Q9ULD8 1083 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 POLIQ9UNA4 740 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 SIT1Q9Y3P8 196 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 DOCK6Q96HP0 2047 aa19.73■□□□□ 0.75
CHMP2A-208ENST00000601220 ARHGEF37A1IGU5 675 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 PODXLO00592 558 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 GUCY2CP25092 1073 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 DTHD1Q6ZMT9 781 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 NPAS3Q8IXF0 933 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 ZNF461Q8TAF7 563 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 DRC1Q96MC2 740 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 FOXQ1Q9C009 403 aa19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 AVENQ9NQS1 362 aaPredicted RBP19.72■□□□□ 0.75
CHMP2A-208ENST00000601220 WDR27A2RRH5 827 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 SLC16A4O15374 487 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 ATP2C1P98194 919 aaPredicted RBP19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 ROR1Q01973 937 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 SLC5A9Q2M3M2 681 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 PABPC1LQ4VXU2 614 aaKnown RBP19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 VARS2Q5ST30 1063 aaKnown RBP19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 MPZL3Q6UWV2 235 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 MTSS1LQ765P7 747 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 ADSSL1Q8N142 457 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 TMEM161BQ8NDZ6 487 aa19.71■□□□□ 0.75
CHMP2A-208ENST00000601220 PJA1Q8NG27 643 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms