RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ENOX2Q16206 610 aaKnown RBP18.36■□□□□ 0.53
TRIM28-215ENST00000601150 LEXMQ3ZCV2 418 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 TMEM87AQ8NBN3 555 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 DDX27Q96GQ7 796 aaKnown RBP18.36■□□□□ 0.53
TRIM28-215ENST00000601150 GOLPH3LQ9H4A5 285 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 MRPL17Q9NRX2 175 aaKnown RBP18.36■□□□□ 0.53
TRIM28-215ENST00000601150 CPSF3Q9UKF6 684 aaKnown RBP18.36■□□□□ 0.53
TRIM28-215ENST00000601150 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
TRIM28-215ENST00000601150 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
TRIM28-215ENST00000601150 TCF20Q9UGU0 1960 aaKnown RBP18.35■□□□□ 0.53
TRIM28-215ENST00000601150 H3BQ06 376 aaPredicted RBP18.35■□□□□ 0.53
TRIM28-215ENST00000601150 TMEM189-UBE2V1I3L0A0 370 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 TBX10O75333 385 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 MYL1P05976 194 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 ADSSP30520 456 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 GLUD2P49448 558 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 KCNQ1P51787 676 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 CLCNKBP51801 687 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 SOX4Q06945 474 aaPredicted RBP18.35■□□□□ 0.53
TRIM28-215ENST00000601150 EHHADHQ08426 723 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 DCLRE1AQ6PJP8 1040 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 EPM2AIP1Q7L775 607 aaPredicted RBP18.35■□□□□ 0.53
TRIM28-215ENST00000601150 TAS1R1Q7RTX1 841 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 GLIS3Q8NEA6 775 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 HASPINQ8TF76 798 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 GPR62Q9BZJ7 368 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 GOLGA2P5Q9HBQ8 144 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 CHMP5Q9NZZ3 219 aa18.35■□□□□ 0.53
TRIM28-215ENST00000601150 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.35■□□□□ 0.53
TRIM28-215ENST00000601150 UBE4BO95155 1302 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 VWA8A3KMH1 1905 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 CLASP2O75122 1294 aaKnown RBP18.34■□□□□ 0.53
TRIM28-215ENST00000601150 B3GAT3O94766 335 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 ZNF202O95125 648 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 GLP2RO95838 553 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 ADRB2P07550 413 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 GARTP22102 1010 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 ACOT2P49753 483 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 DLX2Q07687 328 aaPredicted RBP18.34■□□□□ 0.53
TRIM28-215ENST00000601150 ELAVL2Q12926 359 aaKnown RBP18.34■□□□□ 0.53
TRIM28-215ENST00000601150 UPP1Q16831 310 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 USP41Q3LFD5 358 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 KIAA1841Q6NSI8 718 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 KRBA2Q6ZNG9 492 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 CD302Q8IX05 232 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 ZNF507Q8TCN5 953 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 C18orf25Q96B23 403 aaPredicted RBP18.34■□□□□ 0.53
TRIM28-215ENST00000601150 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 EMILIN2Q9BXX0 1053 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 CHST7Q9NS84 486 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 UNC80Q8N2C7 3258 aa18.34■□□□□ 0.53
TRIM28-215ENST00000601150 C2CD2LO14523 706 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 KLRC4O43908 158 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 LILRB3O75022 631 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 BMP1P13497 986 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 RPL9P32969 192 aaKnown RBP18.33■□□□□ 0.52
TRIM28-215ENST00000601150 POU5F1Q01860 360 aaKnown RBP18.33■□□□□ 0.52
TRIM28-215ENST00000601150 DSG1Q02413 1049 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 SPAG1Q07617 926 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 KCNC3Q14003 757 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 PUS10Q3MIT2 529 aaKnown RBP18.33■□□□□ 0.52
TRIM28-215ENST00000601150 KIAA0319Q5VV43 1072 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 TMEM184AQ6ZMB5 413 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 GPR65Q8IYL9 337 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 VN1R2Q8NFZ6 395 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
TRIM28-215ENST00000601150 FAM212AQ96EL1 285 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 KIF12Q96FN5 646 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 EXOC1Q9NV70 894 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 PLXNA3P51805 1871 aa18.33■□□□□ 0.52
TRIM28-215ENST00000601150 PODXLO00592 558 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 HOXD13P35453 343 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 PSMD2Q13200 908 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 ZBTB6Q15916 424 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 FAM171A1Q5VUB5 890 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 LLGL2Q6P1M3 1020 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 CRELD2Q6UXH1 353 aaPredicted RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 PPFIBP1Q86W92 1011 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 CCDC34Q96HJ3 373 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 MSLNLQ96KJ4 702 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 KLHL5Q96PQ7 755 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 ASB7Q9H672 318 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 SLC39A2Q9NP94 309 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 CLEC1BQ9P126 229 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 CD207Q9UJ71 328 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
TRIM28-215ENST00000601150 HCFC2Q9Y5Z7 792 aa18.32■□□□□ 0.52
TRIM28-215ENST00000601150 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
TRIM28-215ENST00000601150 TRAPPC3O43617 180 aa18.31■□□□□ 0.52
TRIM28-215ENST00000601150 CNPP09543 421 aaKnown RBP18.31■□□□□ 0.52
TRIM28-215ENST00000601150 CYP3A5P20815 502 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms