RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 FUT10Q6P4F1 479 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 LILRA6Q6PI73 481 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 STAMQ92783 540 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 UROC1Q96N76 676 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 FAM193BQ96PV7 902 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 RPS6KC1Q96S38 1066 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 COLEC11Q9BWP8 271 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 ENTPD7Q9NQZ7 604 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 USP25Q9UHP3 1055 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 KCNH3Q9ULD8 1083 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 FAM50BQ9Y247 325 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 PRG3Q9Y2Y8 225 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 ATP6V1DQ9Y5K8 247 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TSC2P49815 1807 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PVALEFA0A1B0GWK0 134 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 EIF3DO15371 548 aaKnown RBP eCLIP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 TEX28O15482 410 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 KRT18P05783 430 aaKnown RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CXCL8P10145 99 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PFKFB1P16118 471 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 LIG1P18858 919 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CYP3A5P20815 502 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 FGFR3P22607 806 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 RPL9P32969 192 aaKnown RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 OR1G1P47890 313 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CLCN4P51793 760 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CLCNKBP51801 687 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 MRPL58Q14197 206 aaKnown RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CLUL1Q15846 466 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 USP41Q3LFD5 358 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 HERC4Q5GLZ8 1057 aaPredicted RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 ANKRD54Q6NXT1 300 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 DCLRE1AQ6PJP8 1040 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 UNC13DQ70J99 1090 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 ZBTB33Q86T24 672 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 GJD3Q8N144 294 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 GLIS3Q8NEA6 775 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 ZNF507Q8TCN5 953 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 SPATA32Q96LK8 384 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 KLHL5Q96PQ7 755 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PYM1Q9BRP8 204 aaKnown RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 LRRC27Q9C0I9 530 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CD320Q9NPF0 282 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 SLC38A7Q9NVC3 462 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PANK4Q9NVE7 773 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PRKAG3Q9UGI9 489 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 CD207Q9UJ71 328 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 BARX2Q9UMQ3 279 aaPredicted RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
SSBP4-208ENST00000600628 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.59□□□□□ -0.87
SSBP4-208ENST00000600628 ANO9A1A5B4 782 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CASTOR2A6NHX0 329 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 LACTBL1A8MY62 500 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 TGFB1I1O43294 461 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MYL1P05976 194 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MYBP10242 640 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 GARTP22102 1010 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 GLUD2P49448 558 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 LIG4P49917 911 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 NUCB2P80303 420 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 AMPD3Q01432 767 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 ZP2Q05996 745 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CUL4BQ13620 913 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CBX2Q14781 532 aaPredicted RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 SEZ6Q53EL9 994 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 GLRA4Q5JXX5 417 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 RTP2Q5QGT7 225 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 SLFN12LQ6IEE8 588 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CD302Q8IX05 232 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 ZSWIM2Q8NEG5 633 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 ENGASEQ8NFI3 743 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 LNX1Q8TBB1 728 aaPredicted RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 HDAC7Q8WUI4 952 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 RABGGTAQ92696 567 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 C18orf25Q96B23 403 aaPredicted RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 DHX58Q96C10 678 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 PAGE5Q96GU1 130 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CLSTN3Q9BQT9 956 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 GOLPH3LQ9H4A5 285 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MRPL44Q9H9J2 332 aaKnown RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 GOLGA2P5Q9HBQ8 144 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 MRPL17Q9NRX2 175 aaKnown RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 ANKFY1Q9P2R3 1169 aa9.58□□□□□ -0.88
SSBP4-208ENST00000600628 AGO2Q9UKV8 859 aaKnown RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
SSBP4-208ENST00000600628 SSX2IPQ9Y2D8 614 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms