RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PI4K2BG5E9Z4 385 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 PIGRP01833 764 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 CLTAP09496 248 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 CXCL8P10145 99 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 MYBP10242 640 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 IDEP14735 1019 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 GAP43P17677 238 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 RPL17P18621 184 aaKnown RBP24.66■■□□□ 1.54
CCDC9-204ENST00000599398 SP100P23497 879 aaPredicted RBP24.66■■□□□ 1.54
CCDC9-204ENST00000599398 MTHFRP42898 656 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 UPP1Q16831 310 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 SLC10A6Q3KNW5 377 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 PALB2Q86YC2 1186 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 MAP4K3Q8IVH8 894 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 GPR65Q8IYL9 337 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 KCNG4Q8TDN1 519 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 DNAJC19Q96DA6 116 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 RIPOR3Q96MK2 946 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 NECTIN4Q96NY8 510 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 MRPL44Q9H9J2 332 aaKnown RBP24.66■■□□□ 1.54
CCDC9-204ENST00000599398 MAN1C1Q9NR34 630 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 TBC1D7Q9P0N9 293 aa24.66■■□□□ 1.54
CCDC9-204ENST00000599398 PDCD11Q14690 1871 aaKnown RBP24.66■■□□□ 1.54
CCDC9-204ENST00000599398 VWA8A3KMH1 1905 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 LOC730098B7Z3J9 87 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 TMEM189-UBE2V1I3L0A0 370 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 MEFVO15553 781 aaPredicted RBP24.65■■□□□ 1.54
CCDC9-204ENST00000599398 ALADP13716 330 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 ME1P48163 572 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 ATAT1Q5SQI0 421 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 ELMSAN1Q6PJG2 1045 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 RNF135Q8IUD6 432 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 C18orf25Q96B23 403 aaPredicted RBP24.65■■□□□ 1.54
CCDC9-204ENST00000599398 DDX27Q96GQ7 796 aaKnown RBP24.65■■□□□ 1.54
CCDC9-204ENST00000599398 MSTO1Q9BUK6 570 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 POMKQ9H5K3 350 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 FNIP2Q9P278 1114 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 SEL1LQ9UBV2 794 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 CFAP45Q9UL16 551 aa24.65■■□□□ 1.54
CCDC9-204ENST00000599398 PODXLO00592 558 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 OGTO15294 1046 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 DCXO43602 365 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 SPATA31D3P0C874 917 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 IGFBP6P24592 240 aaPredicted RBP24.64■■□□□ 1.54
CCDC9-204ENST00000599398 TNFSF9P41273 254 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 DNM1Q05193 864 aaKnown RBP24.64■■□□□ 1.54
CCDC9-204ENST00000599398 PSMD5Q16401 504 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 KYAT1Q16773 422 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 ATL3Q6DD88 541 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 SHC4Q6S5L8 630 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 SPATA31D4Q6ZUB0 917 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 ZNF720Q7Z2F6 126 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 STAMQ92783 540 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 DHX58Q96C10 678 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 ST6GALNAC4Q9H4F1 302 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 DPP7Q9UHL4 492 aa24.64■■□□□ 1.54
CCDC9-204ENST00000599398 MTCL1Q9Y4B5 1905 aaKnown RBP24.63■■□□□ 1.53
CCDC9-204ENST00000599398 TRAPPC3O43617 180 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 PPP2R3AQ06190 1150 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 SPAG1Q07617 926 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 HERC4Q5GLZ8 1057 aaPredicted RBP24.63■■□□□ 1.53
CCDC9-204ENST00000599398 SLC39A4Q6P5W5 647 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.63■■□□□ 1.53
CCDC9-204ENST00000599398 C3orf58Q8NDZ4 430 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 PIK3R5Q8WYR1 880 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 RPF1Q9H9Y2 349 aaKnown RBP24.63■■□□□ 1.53
CCDC9-204ENST00000599398 PLEKHA5Q9HAU0 1116 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 MUTYHQ9UIF7 546 aa24.63■■□□□ 1.53
CCDC9-204ENST00000599398 A0A0B4J269 797 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 ANKRD63C9JTQ0 380 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 I3L4J1 428 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 TGM5O43548 720 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 GCNT3O95395 438 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 BRCC3P46736 316 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 ZBTB41Q5SVQ8 909 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 AXDND1Q5T1B0 1012 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-204ENST00000599398 PDXDC1Q6P996 788 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 LNX1Q8TBB1 728 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-204ENST00000599398 HVCN1Q96D96 273 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 KIF12Q96FN5 646 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 PANK4Q9NVE7 773 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 PCDHA7Q9UN72 937 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 NUB1Q9Y5A7 615 aa24.62■■□□□ 1.53
CCDC9-204ENST00000599398 TTC26A0AVF1 554 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 TISP43B9A030 160 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 RPL9P32969 192 aaKnown RBP24.61■■□□□ 1.53
CCDC9-204ENST00000599398 E2F4Q16254 413 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 ADALQ6DHV7 355 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 SLFN12LQ6IEE8 588 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 CD300LGQ6UXG3 332 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 GPR149Q86SP6 731 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 IQUBQ8NA54 791 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 FEZF2Q8TBJ5 459 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 FAM212AQ96EL1 285 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 LRRC27Q9C0I9 530 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 TNMDQ9H2S6 317 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 CUEDC2Q9H467 287 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 TUBGCP4Q9UGJ1 667 aa24.61■■□□□ 1.53
CCDC9-204ENST00000599398 NR2E1Q9Y466 385 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms