RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 DDHD2O94830 711 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 CXCL8P10145 99 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 KCNE1P15382 129 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 ACOT2P49753 483 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 RNASELQ05823 741 aaKnown RBP19.78■□□□□ 0.76
LIG1-216ENST00000598938 GRIK3Q13003 919 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 NAB2Q15742 525 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 ZNF280BQ86YH2 543 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 ADSSL1Q8N142 457 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 PABPC5Q96DU9 382 aaKnown RBP19.78■□□□□ 0.76
LIG1-216ENST00000598938 FAM213AQ9BRX8 229 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 NRDE2Q9H7Z3 1164 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 RPF1Q9H9Y2 349 aaKnown RBP19.78■□□□□ 0.76
LIG1-216ENST00000598938 PLEKHA5Q9HAU0 1116 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 HSPBP1Q9NZL4 362 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 TRAF3IP3Q9Y228 551 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 C5orf67F2Z3F1 127 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 H3BNC9 293 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 CLIC2O15247 247 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 DCXO43602 365 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 LAG3P18627 525 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 PTMSP20962 102 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 BMPR1AP36894 532 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 DSC1Q08554 894 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 ZCWPW2Q504Y3 356 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 EPC2Q52LR7 807 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 SPOUT1Q5T280 376 aaKnown RBP19.77■□□□□ 0.76
LIG1-216ENST00000598938 RBM43Q6ZSC3 357 aaKnown RBP19.77■□□□□ 0.76
LIG1-216ENST00000598938 GPD1LQ8N335 351 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 COLGALT1Q8NBJ5 622 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 FBXL18Q96ME1 805 aa19.77■□□□□ 0.76
LIG1-216ENST00000598938 PPP1R10Q96QC0 940 aaKnown RBP19.77■□□□□ 0.76
LIG1-216ENST00000598938 ATG2AQ2TAZ0 1938 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 SMIM28A0A1B0GU29 152 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 GOLGA8IPA6NC78 632 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 GOLGA8JA6NMD2 632 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 LACTBL1A8MY62 500 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 NCK2O43639 380 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 CALUO43852 315 aaPredicted RBP19.76■□□□□ 0.75
LIG1-216ENST00000598938 THP07101 528 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 CD44P16070 742 aaKnown RBP19.76■□□□□ 0.75
LIG1-216ENST00000598938 CTNNB1P35222 781 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 PPP1R2P41236 205 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 PPP2R3AQ06190 1150 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 NFIL3Q16649 462 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 CENPPQ6IPU0 288 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 ALYREFQ86V81 257 aaKnown RBP19.76■□□□□ 0.75
LIG1-216ENST00000598938 SLC9A9Q8IVB4 645 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 CD302Q8IX05 232 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 COLGALT2Q8IYK4 626 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 ZMAT2Q96NC0 199 aaKnown RBP19.76■□□□□ 0.75
LIG1-216ENST00000598938 KIAA1586Q9HCI6 787 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 AAASQ9NRG9 546 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 DMAC2Q9NW81 257 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 DNAJB4Q9UDY4 337 aa19.76■□□□□ 0.75
LIG1-216ENST00000598938 PPP1R3GB7ZBB8 358 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 ZC3H11AO75152 810 aaKnown RBP eCLIP19.75■□□□□ 0.75
LIG1-216ENST00000598938 RB1P06400 928 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 CYP2J2P51589 502 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 BCAR1P56945 870 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 STIM1Q13586 685 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 MYBPC2Q14324 1141 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 GLRA4Q5JXX5 417 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 CCDC183Q5T5S1 534 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 KCNT2Q6UVM3 1135 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 BRSK2Q8IWQ3 736 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 XXYLT1Q8NBI6 393 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 ZNF558Q96NG5 402 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 FAM193BQ96PV7 902 aaPredicted RBP19.75■□□□□ 0.75
LIG1-216ENST00000598938 TSPAN18Q96SJ8 248 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 TMEM175Q9BSA9 504 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 PLVAPQ9BX97 442 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 NSUN3Q9H649 340 aaKnown RBP19.75■□□□□ 0.75
LIG1-216ENST00000598938 ZNF318Q5VUA4 2279 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 CITO14578 2027 aa19.75■□□□□ 0.75
LIG1-216ENST00000598938 TDRD15B5MCY1 1934 aaKnown RBP19.74■□□□□ 0.75
LIG1-216ENST00000598938 CARNS1A5YM72 827 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 IL18RAPO95256 599 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 NR3C1P04150 777 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 GALTP07902 379 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 PBX3P40426 434 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 SLC11A1P49279 550 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 TUSC3Q13454 348 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 HSP90AA2PQ14568 343 aaPredicted RBP19.74■□□□□ 0.75
LIG1-216ENST00000598938 EDRF1Q3B7T1 1238 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 CBWD2Q8IUF1 395 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 P2RX5Q93086 422 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 DHTKD1Q96HY7 919 aaPredicted RBP19.74■□□□□ 0.75
LIG1-216ENST00000598938 ASB7Q9H672 318 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 RBAKQ9NYW8 714 aaPredicted RBP19.74■□□□□ 0.75
LIG1-216ENST00000598938 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 PCDHB12Q9Y5F1 795 aa19.74■□□□□ 0.75
LIG1-216ENST00000598938 C19orf67A6NJJ6 358 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 ZNF233A6NK53 670 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 PSMA7O14818 248 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 ALDH7A1P49419 539 aaKnown RBP19.73■□□□□ 0.75
LIG1-216ENST00000598938 ZP2Q05996 745 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 GPM6BQ13491 265 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 ZBTB6Q15916 424 aa19.73■□□□□ 0.75
LIG1-216ENST00000598938 SNRNP35Q16560 246 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms