RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 SOX4Q06945 474 aaPredicted RBP15.1■□□□□ 0.01
UPF1-205ENST00000598209 FAM26FQ5R3K3 315 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 STXBP4Q6ZWJ1 553 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 GLIS3Q8NEA6 775 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 VN1R2Q8NFZ6 395 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 POMGNT1Q8WZA1 660 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 UROC1Q96N76 676 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 GPR62Q9BZJ7 368 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 GOLPH3LQ9H4A5 285 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 RPF1Q9H9Y2 349 aaKnown RBP15.1■□□□□ 0.01
UPF1-205ENST00000598209 PLEKHA5Q9HAU0 1116 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 GOLGA2P5Q9HBQ8 144 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 MRPL17Q9NRX2 175 aaKnown RBP15.1■□□□□ 0.01
UPF1-205ENST00000598209 AGO2Q9UKV8 859 aaKnown RBP15.1■□□□□ 0.01
UPF1-205ENST00000598209 PLXNA3P51805 1871 aa15.1■□□□□ 0.01
UPF1-205ENST00000598209 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 TTC26A0AVF1 554 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 LACTBL1A8MY62 500 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 C2CD2LO14523 706 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 CLASP2O75122 1294 aaKnown RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 BMP1P13497 986 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 ADSSP30520 456 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 GLUD2P49448 558 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 CLCNKBP51801 687 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 EHHADHQ08426 723 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 POSTNQ15063 836 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 ENOX2Q16206 610 aaKnown RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 C18orf25Q96B23 403 aaPredicted RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 TMEM206Q9H813 350 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 CPSF3Q9UKF6 684 aaKnown RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 SSX2IPQ9Y2D8 614 aa15.09■□□□□ 0.01
UPF1-205ENST00000598209 SPTBN5Q9NRC6 3674 aaKnown RBP15.09■□□□□ 0.01
UPF1-205ENST00000598209 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.01
UPF1-205ENST00000598209 MTCL1Q9Y4B5 1905 aaKnown RBP15.08■□□□□ 0
UPF1-205ENST00000598209 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0
UPF1-205ENST00000598209 EIF3DO15371 548 aaKnown RBP eCLIP15.08■□□□□ 0
UPF1-205ENST00000598209 LILRB3O75022 631 aa15.08■□□□□ 0
UPF1-205ENST00000598209 B3GAT3O94766 335 aa15.08■□□□□ 0
UPF1-205ENST00000598209 ACOT2P49753 483 aa15.08■□□□□ 0
UPF1-205ENST00000598209 DSG1Q02413 1049 aa15.08■□□□□ 0
UPF1-205ENST00000598209 SPAG1Q07617 926 aa15.08■□□□□ 0
UPF1-205ENST00000598209 KCNC3Q14003 757 aa15.08■□□□□ 0
UPF1-205ENST00000598209 CLUL1Q15846 466 aa15.08■□□□□ 0
UPF1-205ENST00000598209 UPP1Q16831 310 aa15.08■□□□□ 0
UPF1-205ENST00000598209 USP41Q3LFD5 358 aa15.08■□□□□ 0
UPF1-205ENST00000598209 KIAA0319Q5VV43 1072 aa15.08■□□□□ 0
UPF1-205ENST00000598209 KIAA1841Q6NSI8 718 aa15.08■□□□□ 0
UPF1-205ENST00000598209 LLGL2Q6P1M3 1020 aa15.08■□□□□ 0
UPF1-205ENST00000598209 DCLRE1AQ6PJP8 1040 aa15.08■□□□□ 0
UPF1-205ENST00000598209 FAM212AQ96EL1 285 aa15.08■□□□□ 0
UPF1-205ENST00000598209 KIF12Q96FN5 646 aa15.08■□□□□ 0
UPF1-205ENST00000598209 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
UPF1-205ENST00000598209 MSLNLQ96KJ4 702 aa15.08■□□□□ 0
UPF1-205ENST00000598209 B3GALT6Q96L58 329 aa15.08■□□□□ 0
UPF1-205ENST00000598209 CHST7Q9NS84 486 aa15.08■□□□□ 0
UPF1-205ENST00000598209 CLEC1BQ9P126 229 aa15.08■□□□□ 0
UPF1-205ENST00000598209 HCFC2Q9Y5Z7 792 aa15.08■□□□□ 0
UPF1-205ENST00000598209 XIRP2A4UGR9 3374 aa15.08■□□□□ 0
UPF1-205ENST00000598209 GOLGA6L4A6NEF3 574 aa15.07■□□□□ 0
UPF1-205ENST00000598209 PODXLO00592 558 aa15.07■□□□□ 0
UPF1-205ENST00000598209 KLRC4O43908 158 aa15.07■□□□□ 0
UPF1-205ENST00000598209 ZNF202O95125 648 aa15.07■□□□□ 0
UPF1-205ENST00000598209 ADRB2P07550 413 aa15.07■□□□□ 0
UPF1-205ENST00000598209 CNPP09543 421 aaKnown RBP15.07■□□□□ 0
UPF1-205ENST00000598209 SRGAP2BP0DMP2 458 aa15.07■□□□□ 0
UPF1-205ENST00000598209 GARTP22102 1010 aa15.07■□□□□ 0
UPF1-205ENST00000598209 IGFBP6P24592 240 aaPredicted RBP15.07■□□□□ 0
UPF1-205ENST00000598209 ELAVL2Q12926 359 aaKnown RBP15.07■□□□□ 0
UPF1-205ENST00000598209 PUS10Q3MIT2 529 aaKnown RBP15.07■□□□□ 0
UPF1-205ENST00000598209 FAM171A1Q5VUB5 890 aa15.07■□□□□ 0
UPF1-205ENST00000598209 PTCRAQ6ISU1 281 aaPredicted RBP15.07■□□□□ 0
UPF1-205ENST00000598209 TMEM184AQ6ZMB5 413 aa15.07■□□□□ 0
UPF1-205ENST00000598209 KRBA2Q6ZNG9 492 aa15.07■□□□□ 0
UPF1-205ENST00000598209 EPM2AIP1Q7L775 607 aaPredicted RBP15.07■□□□□ 0
UPF1-205ENST00000598209 CD302Q8IX05 232 aa15.07■□□□□ 0
UPF1-205ENST00000598209 C3orf58Q8NDZ4 430 aa15.07■□□□□ 0
UPF1-205ENST00000598209 ZNF507Q8TCN5 953 aa15.07■□□□□ 0
UPF1-205ENST00000598209 KLHL5Q96PQ7 755 aa15.07■□□□□ 0
UPF1-205ENST00000598209 COL25A1Q9BXS0 654 aaPredicted RBP15.07■□□□□ 0
UPF1-205ENST00000598209 EMILIN2Q9BXX0 1053 aa15.07■□□□□ 0
UPF1-205ENST00000598209 SLC39A2Q9NP94 309 aa15.07■□□□□ 0
UPF1-205ENST00000598209 EXOC1Q9NV70 894 aa15.07■□□□□ 0
UPF1-205ENST00000598209 TUBGCP4Q9UGJ1 667 aa15.07■□□□□ 0
UPF1-205ENST00000598209 CD207Q9UJ71 328 aa15.07■□□□□ 0
UPF1-205ENST00000598209 UBQLN1Q9UMX0 589 aaKnown RBP15.07■□□□□ 0
UPF1-205ENST00000598209 GRXCR2A6NFK2 248 aa15.06■□□□□ 0
UPF1-205ENST00000598209 MYL1P05976 194 aa15.06■□□□□ 0
UPF1-205ENST00000598209 PRR29P0C7W0 189 aa15.06■□□□□ 0
UPF1-205ENST00000598209 KLRC2P26717 231 aa15.06■□□□□ 0
UPF1-205ENST00000598209 RPL9P32969 192 aaKnown RBP15.06■□□□□ 0
UPF1-205ENST00000598209 HOXD13P35453 343 aa15.06■□□□□ 0
UPF1-205ENST00000598209 ZBTB6Q15916 424 aa15.06■□□□□ 0
UPF1-205ENST00000598209 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
UPF1-205ENST00000598209 ANKRD54Q6NXT1 300 aa15.06■□□□□ 0
UPF1-205ENST00000598209 ARMCX5Q6P1M9 558 aa15.06■□□□□ 0
UPF1-205ENST00000598209 CD300LGQ6UXG3 332 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms