RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ATG2BQ96BY7 2078 aa13.31□□□□□ -0.28
SOX2-OT-228ENST00000597828 PHLPP2Q6ZVD8 1323 aa13.31□□□□□ -0.28
SOX2-OT-228ENST00000597828 MYO16Q9Y6X6 1858 aa13.31□□□□□ -0.28
SOX2-OT-228ENST00000597828 TMEM189-UBE2V1I3L0A0 370 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 HIP1RO75146 1068 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 LRRN2O75325 713 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 B3GAT3O94766 335 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 C1RP00736 705 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 MUTP22033 750 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 FGFR3P22607 806 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 RFX1P22670 979 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 OR1D2P34982 312 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 MAPK7Q13164 816 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 PTGDRQ13258 359 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 AXDND1Q5T1B0 1012 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 ING5Q8WYH8 240 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 ZMAT2Q96NC0 199 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 FOXQ1Q9C009 403 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 ARHGEF3Q9NR81 526 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 MTRRQ9UBK8 725 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 CDY1Q9Y6F8 540 aa13.3□□□□□ -0.28
SOX2-OT-228ENST00000597828 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 K7ERI5 159 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 HARSP12081 509 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 NPTX2P47972 431 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 TRAPPC10P48553 1259 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 EFNA5P52803 228 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 UPP1Q16831 310 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 POTEHQ6S545 545 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 FGF13Q92913 245 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 ACO2Q99798 780 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 TARS2Q9BW92 718 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 DNMT3BQ9UBC3 853 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 CDH7Q9ULB5 785 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 DMXL1Q9Y485 3027 aa13.29□□□□□ -0.28
SOX2-OT-228ENST00000597828 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SMIM28A0A1B0GU29 152 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SFI1A8K8P3 1242 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 ABLIM1O14639 778 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 GLULP15104 373 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 HOXA9P31269 272 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 GRM5P41594 1212 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 GPC5P78333 572 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 RAB33AQ14088 237 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 DCLRE1AQ6PJP8 1040 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 NPAS3Q8IXF0 933 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 NXPE3Q969Y0 559 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 ZBTB45Q96K62 511 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SNX27Q96L92 541 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 PTPRHQ9HD43 1115 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 SLC2A4RGQ9NR83 387 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 DLGAP2Q9P1A6 1054 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 ARHGAP28Q9P2N2 729 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 R4GN57 208 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 GREB1Q4ZG55 1949 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 ANAPC1Q9H1A4 1944 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 GVINP1Q7Z2Y8 2422 aa13.28□□□□□ -0.28
SOX2-OT-228ENST00000597828 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.28
SOX2-OT-228ENST00000597828 WDR27A2RRH5 827 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC16A4O15374 487 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 ROR1Q01973 937 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 DMP1Q13316 513 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZRSR1Q15695 479 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 RINT1Q6NUQ1 792 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 ALKAL1Q6UXT8 129 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 PJA1Q8NG27 643 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 C18orf25Q96B23 403 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 PLIN2Q99541 437 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 CCDC94Q9BW85 323 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 KMT5AQ9NQR1 393 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 SH2B1Q9NRF2 756 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 OTOGLQ3ZCN5 2332 aa13.27□□□□□ -0.29
SOX2-OT-228ENST00000597828 PODXLO00592 558 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms