RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ARHGEF3Q9NR81 526 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
LSM4-205ENST00000597776 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 CDH7Q9ULB5 785 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 TNFSF13BQ9Y275 285 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 CDY1Q9Y6F8 540 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 PHLPP2Q6ZVD8 1323 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
LSM4-205ENST00000597776 COL4A3Q01955 1670 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 SMIM28A0A1B0GU29 152 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 XYLBO75191 536 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 HOXA9P31269 272 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 GRM5P41594 1212 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 MAPK7Q13164 816 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 PDIA5Q14554 519 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 PDXDC1Q6P996 788 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 DCLRE1AQ6PJP8 1040 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 ING5Q8WYH8 240 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 UROC1Q96N76 676 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 ZMAT2Q96NC0 199 aaKnown RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 TARS2Q9BW92 718 aaKnown RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 MRPL4Q9BYD3 311 aaKnown RBP11.56□□□□□ -0.56
LSM4-205ENST00000597776 FOXQ1Q9C009 403 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 SLC2A4RGQ9NR83 387 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 ARHGAP28Q9P2N2 729 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
LSM4-205ENST00000597776 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 SLC16A4O15374 487 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 HARSP12081 509 aaKnown RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 YARSP54577 528 aaKnown RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 GPC5P78333 572 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 RINT1Q6NUQ1 792 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 APBB1IPQ7Z5R6 666 aaPredicted RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 NPAS3Q8IXF0 933 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 SNX27Q96L92 541 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 KXD1Q9BQD3 176 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 RAB34Q9BZG1 259 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 BACE2Q9Y5Z0 518 aa11.55□□□□□ -0.56
LSM4-205ENST00000597776 ZFP37Q9Y6Q3 630 aaPredicted RBP11.55□□□□□ -0.56
LSM4-205ENST00000597776 FRYLO94915 3013 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 PODXLO00592 558 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ABLIM1O14639 778 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 LRRN2O75325 713 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ROR1Q01973 937 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 SNW1Q13573 536 aaKnown RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 SLC5A9Q2M3M2 681 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 SEZ6Q53EL9 994 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 XKR4Q5GH76 650 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 MCTP1Q6DN14 999 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 MPZL3Q6UWV2 235 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 C1orf186Q6ZWK4 172 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ADSSL1Q8N142 457 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 TMEM130Q8N3G9 435 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 PJA1Q8NG27 643 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ZBTB45Q96K62 511 aaPredicted RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 DRC1Q96MC2 740 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 PLIN2Q99541 437 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 TCHPQ9BT92 498 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 TOPORSQ9NS56 1045 aaPredicted RBP11.54□□□□□ -0.56
LSM4-205ENST00000597776 DLGAP2Q9P1A6 1054 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 SIT1Q9Y3P8 196 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 R4GN57 208 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 MYH15Q9Y2K3 1946 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 TRIP11Q15643 1979 aa11.54□□□□□ -0.56
LSM4-205ENST00000597776 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
LSM4-205ENST00000597776 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
LSM4-205ENST00000597776 DCHS1Q96JQ0 3298 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 LAD1O00515 517 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 POU2F2P09086 479 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 MCF2P10911 925 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 GLULP15104 373 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 KCNE1P15382 129 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 PROZP22891 400 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 PRPHP41219 470 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 ARPP19P56211 112 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
LSM4-205ENST00000597776 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms