RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 TMEM189-UBE2V1I3L0A0 370 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 LDHAP00338 332 aaKnown RBP19.7■□□□□ 0.74
IRF3-216ENST00000597180 CTSAP10619 480 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 PNOCQ13519 176 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 SMC1AQ14683 1233 aaKnown RBP19.7■□□□□ 0.74
IRF3-216ENST00000597180 ZBTB6Q15916 424 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 UPP1Q16831 310 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 KNOP1Q1ED39 458 aaKnown RBP19.7■□□□□ 0.74
IRF3-216ENST00000597180 PLPP4Q5VZY2 271 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 ARMCX5Q6P1M9 558 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 TMC7Q7Z402 723 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 NELFCDQ8IXH7 590 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 MICAL1Q8TDZ2 1067 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 RABGGTAQ92696 567 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 PPP2R3CQ969Q6 453 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 HERC2P3Q9BVR0 1158 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 ADAM28Q9UKQ2 775 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 IRAK3Q9Y616 596 aa19.7■□□□□ 0.74
IRF3-216ENST00000597180 PRUNE2Q8WUY3 3088 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 KIF4AO95239 1232 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 SOD2P04179 222 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 CLCNKBP51801 687 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 HYAL1Q12794 435 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 BMS1Q14692 1282 aaKnown RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 FUT10Q6P4F1 479 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 DCLRE1AQ6PJP8 1040 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 MRPL43Q8N983 215 aaKnown RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 ZSWIM2Q8NEG5 633 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 C18orf25Q96B23 403 aaPredicted RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 DDX27Q96GQ7 796 aaKnown RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 ASB7Q9H672 318 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 GOLGA2P5Q9HBQ8 144 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 AGPAT3Q9NRZ7 376 aa19.69■□□□□ 0.74
IRF3-216ENST00000597180 CGNQ9P2M7 1197 aaKnown RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 HOOK1Q9UJC3 728 aaKnown RBP19.69■□□□□ 0.74
IRF3-216ENST00000597180 NCK2O43639 380 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 EXTL3O43909 919 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 KINO60870 393 aaKnown RBP19.68■□□□□ 0.74
IRF3-216ENST00000597180 CYP3A5P20815 502 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 RPL9P32969 192 aaKnown RBP19.68■□□□□ 0.74
IRF3-216ENST00000597180 SKIV2LQ15477 1246 aaKnown RBP19.68■□□□□ 0.74
IRF3-216ENST00000597180 HS2ST1Q7LGA3 356 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 BRSK2Q8IWQ3 736 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 C12orf56Q8IXR9 622 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 GPD1LQ8N335 351 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 SPATA20Q8TB22 786 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 SAAL1Q96ER3 474 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 KIF12Q96FN5 646 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 FAM213AQ9BRX8 229 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 GPR62Q9BZJ7 368 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 TUBGCP4Q9UGJ1 667 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 UBQLN1Q9UMX0 589 aaKnown RBP19.68■□□□□ 0.74
IRF3-216ENST00000597180 DERAQ9Y315 318 aa19.68■□□□□ 0.74
IRF3-216ENST00000597180 C2orf71A6NGG8 1288 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 HIDE1A8MVS5 230 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 XPOTO43592 962 aaKnown RBP19.67■□□□□ 0.74
IRF3-216ENST00000597180 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
IRF3-216ENST00000597180 TADA2AO75478 443 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 IL18RAPO95256 599 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 CXCL14O95715 111 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 SPAG1Q07617 926 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 PTPN14Q15678 1187 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 DUSP6Q16828 381 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 CTC1Q2NKJ3 1217 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 JADE1Q6IE81 842 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 CD300LGQ6UXG3 332 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 FBXL18Q96ME1 805 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 GSDMAQ96QA5 445 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 CDCA3Q99618 268 aaPredicted RBP19.67■□□□□ 0.74
IRF3-216ENST00000597180 PCIF1Q9H4Z3 704 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 TLE6Q9H808 572 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 PRDM6Q9NQX0 595 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 CHST7Q9NS84 486 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 COG5Q9UP83 839 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 C2CD2Q9Y426 696 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 SCN1AP35498 2009 aa19.67■□□□□ 0.74
IRF3-216ENST00000597180 SF3B1O75533 1304 aaKnown RBP eCLIP19.67■□□□□ 0.746e-8■■■■■ 54.2
IRF3-216ENST00000597180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.66■□□□□ 0.74
IRF3-216ENST00000597180 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 GOLGA8IPA6NC78 632 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 GOLGA8JA6NMD2 632 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 PODXLO00592 558 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 LILRB3O75022 631 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 SMC2O95347 1197 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 NFICP08651 508 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 LRPAP1P30533 357 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 GTF2F1P35269 517 aaKnown RBP eCLIP19.66■□□□□ 0.744e-10■■■■■ 32.8
IRF3-216ENST00000597180 NRIP1P48552 1158 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 ELAVL2Q12926 359 aaKnown RBP19.66■□□□□ 0.74
IRF3-216ENST00000597180 TMEM132DQ14C87 1099 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 TAS1R1Q7RTX1 841 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 NT5DC4Q86YG4 428 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 EFHBQ8N7U6 833 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 C3orf58Q8NDZ4 430 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 GOLGA5Q8TBA6 731 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 HASPINQ8TF76 798 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 TMEM174Q8WUU8 243 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 AUTS2Q8WXX7 1259 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms