RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 FAM189A1O60320 539 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TADA2AO75478 443 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TNNC2P02585 160 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 ALDH2P05091 517 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TRIM49P0CI25 452 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TRIM49CP0CI26 452 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 CDK11BP21127 795 aaKnown RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 DNAJB2P25686 324 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 ALDH7A1P49419 539 aaKnown RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 WNT7BP56706 349 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 BCAR1P56945 870 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 DLG4P78352 724 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 HTRA4P83105 476 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 GRIK3Q13003 919 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 BIRC3Q13489 604 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 HSP90AA2PQ14568 343 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 SURF1Q15526 300 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 EDRF1Q3B7T1 1238 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TTI2Q6NXR4 508 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 FAM43BQ6ZT52 329 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 SPRED2Q7Z698 418 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 C12orf56Q8IXR9 622 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 LRRC43Q8N309 656 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 ZNF689Q96CS4 500 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-206ENST00000597047 ANKRD36BP1Q96IX9 119 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 C17orf80Q9BSJ5 609 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 TSPY26PQ9H489 355 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 DMAC2Q9NW81 257 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 DPP3Q9NY33 737 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 PCDHB12Q9Y5F1 795 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 ANK1P16157 1881 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 LRRIQ3A6PVS8 624 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 RFXAPO00287 272 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 NRP1O14786 923 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 XPOTO43592 962 aaKnown RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SLC11A1P49279 550 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ZNF165P49910 485 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 CLCNKBP51801 687 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 VAMP7P51809 220 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SOX4Q06945 474 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 TUSC3Q13454 348 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ZCWPW2Q504Y3 356 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SPATA1Q5VX52 437 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 KCNT2Q6UVM3 1135 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ALKAL1Q6UXT8 129 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 FILIP1Q7Z7B0 1213 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 CD302Q8IX05 232 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 EFCAB13Q8IY85 973 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 CRIPAKQ8N1N5 446 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 COLGALT1Q8NBJ5 622 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 RNF214Q8ND24 703 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 GSTCDQ8NEC7 633 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 OR5B17Q8NGF7 314 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ELMO3Q96BJ8 720 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ZNF558Q96NG5 402 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 PAAF1Q9BRP4 392 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 MTMR12Q9C0I1 747 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 PRO3102Q9H379 93 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ASB7Q9H672 318 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 CWH43Q9H720 699 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 PLEKHA5Q9HAU0 1116 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SAMSN1Q9NSI8 373 aaKnown RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SLC38A7Q9NVC3 462 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 FANCLQ9NW38 375 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 CNTN3Q9P232 1028 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 ARMCX3Q9UH62 379 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 UBQLN1Q9UMX0 589 aaKnown RBP10.07□□□□□ -0.8
ZNF548-206ENST00000597047 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 NFE2L3Q9Y4A8 694 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 NUB1Q9Y5A7 615 aa10.07□□□□□ -0.8
ZNF548-206ENST00000597047 SMTNL1A8MU46 457 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 F8W810 466 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 I3L4J1 428 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 DLL1O00548 723 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-206ENST00000597047 PODXLO00592 558 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 B4GALT3O60512 393 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 ITGB3P05106 788 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 GALTP07902 379 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-206ENST00000597047 KCNE1P15382 129 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 LAG3P18627 525 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 GCLMP48507 274 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
ZNF548-206ENST00000597047 SMAD3P84022 425 aaKnown RBP10.06□□□□□ -0.8
ZNF548-206ENST00000597047 MYL5Q02045 173 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 BFSP1Q12934 665 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 TRPC3Q13507 836 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 MYBPC2Q14324 1141 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 PSMD6Q15008 389 aa10.06□□□□□ -0.8
ZNF548-206ENST00000597047 NFIL3Q16649 462 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms