RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 ZBTB6Q15916 424 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 RALGAPA2Q2PPJ7 1873 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 LRIT3Q3SXY7 679 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 C1orf220Q5T0J3 134 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 SPOUT1Q5T280 376 aaKnown RBP16.83■□□□□ 0.28
SMCO4-206ENST00000596676 IRF2BP1Q8IU81 584 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 COLGALT2Q8IYK4 626 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 FAM186BQ8IYM0 893 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 TMEM174Q8WUU8 243 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 BCL7CQ8WUZ0 217 aaPredicted RBP16.83■□□□□ 0.28
SMCO4-206ENST00000596676 ZNF516Q92618 1163 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 BORCS6Q96GS4 357 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 KIAA1586Q9HCI6 787 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
SMCO4-206ENST00000596676 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
SMCO4-206ENST00000596676 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
SMCO4-206ENST00000596676 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 BICDL2A1A5D9 508 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 LRRIQ3A6PVS8 624 aaPredicted RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 PPEF2O14830 753 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 RPL13P26373 211 aaKnown RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 ERCC5P28715 1186 aaPredicted RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 BCAR1P56945 870 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 SMAD3P84022 425 aaKnown RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 TAP1Q03518 808 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 DSC1Q08554 894 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 PSMD6Q15008 389 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
SMCO4-206ENST00000596676 PLEKHA5Q9HAU0 1116 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
SMCO4-206ENST00000596676 IL18RAPO95256 599 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 GALTP07902 379 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 PSMC2P35998 433 aaKnown RBP16.81■□□□□ 0.28
SMCO4-206ENST00000596676 OR1G1P47890 313 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
SMCO4-206ENST00000596676 GRIK3Q13003 919 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 TMEM132DQ14C87 1099 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 FILIP1Q7Z7B0 1213 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 LRRC43Q8N309 656 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 COLGALT1Q8NBJ5 622 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 PARD3BQ8TEW8 1205 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 ELMO3Q96BJ8 720 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 TIFAQ96CG3 184 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 ASB7Q9H672 318 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
SMCO4-206ENST00000596676 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
SMCO4-206ENST00000596676 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 RFXAPO00287 272 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 NRP1O14786 923 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 ITGB1P05556 798 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 CLCNKBP51801 687 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 VAMP7P51809 220 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 TUSC3Q13454 348 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 NCAPHQ15003 741 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 RAB30Q15771 203 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 CD300LGQ6UXG3 332 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 CLP1Q92989 425 aaKnown RBP16.8■□□□□ 0.28
SMCO4-206ENST00000596676 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 FAM193BQ96PV7 902 aaPredicted RBP16.8■□□□□ 0.28
SMCO4-206ENST00000596676 MRPL9Q9BYD2 267 aaKnown RBP16.8■□□□□ 0.28
SMCO4-206ENST00000596676 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 MMRN2Q9H8L6 949 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 NFE2L3Q9Y4A8 694 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 NLRC5Q86WI3 1866 aa16.8■□□□□ 0.28
SMCO4-206ENST00000596676 EPB41P11171 864 aaKnown RBP16.79■□□□□ 0.28
SMCO4-206ENST00000596676 TNNI1P19237 187 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 CTNNB1P35222 781 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 PPP3CAQ08209 521 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
SMCO4-206ENST00000596676 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
SMCO4-206ENST00000596676 PPP2R2DQ66LE6 453 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 FOXR2Q6PJQ5 311 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 CD302Q8IX05 232 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 DHX40Q8IX18 779 aaKnown RBP16.79■□□□□ 0.28
SMCO4-206ENST00000596676 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 C3orf58Q8NDZ4 430 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 ENOX1Q8TC92 643 aaKnown RBP16.79■□□□□ 0.28
SMCO4-206ENST00000596676 CGRRF1Q99675 332 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 SLC28A3Q9HAS3 691 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 INTS13Q9NVM9 706 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 DPP3Q9NY33 737 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 CHD7Q9P2D1 2997 aa16.79■□□□□ 0.28
SMCO4-206ENST00000596676 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 LRRN2O75325 713 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms