RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 SCFD1Q8WVM8 642 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 HERC2P3Q9BVR0 1158 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 CLDND1Q9NY35 253 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 SF3B1O75533 1304 aaKnown RBP eCLIP16.3■□□□□ 0.29e-7■■■■■ 57.4
IRF3-211ENST00000596644 HIDE1A8MVS5 230 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 LACTBL1A8MY62 500 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 TULP1O00294 542 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 GADD45BO75293 160 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 URODP06132 367 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.2
IRF3-211ENST00000596644 CLCNKBP51801 687 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 SOX4Q06945 474 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 SPAG1Q07617 926 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 SNW1Q13573 536 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 KIAA1841Q6NSI8 718 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 CD302Q8IX05 232 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 MRPL43Q8N983 215 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 C18orf25Q96B23 403 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 PABPC5Q96DU9 382 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 CDCA3Q99618 268 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 UBE2ZQ9H832 354 aaPredicted RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 HOOK1Q9UJC3 728 aaKnown RBP16.3■□□□□ 0.2
IRF3-211ENST00000596644 COL6A3P12111 3177 aa16.3■□□□□ 0.2
IRF3-211ENST00000596644 ANK1P16157 1881 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 C2orf71A6NGG8 1288 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 PODXLO00592 558 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 PER2O15055 1255 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
IRF3-211ENST00000596644 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
IRF3-211ENST00000596644 B3GAT3O94766 335 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 HOXD13P35453 343 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 GLUD2P49448 558 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 STK4Q13043 487 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 PNOCQ13519 176 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 DUSP6Q16828 381 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 UPP1Q16831 310 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 BMT2Q1RMZ1 405 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 TIGD1Q96MW7 591 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 TSPAN18Q96SJ8 248 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 MRPL17Q9NRX2 175 aaKnown RBP16.29■□□□□ 0.2
IRF3-211ENST00000596644 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
IRF3-211ENST00000596644 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
IRF3-211ENST00000596644 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.29■□□□□ 0.2
IRF3-211ENST00000596644 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 TMEM189-UBE2V1I3L0A0 370 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 C2CD2LO14523 706 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 EXTL3O43909 919 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 IL18RAPO95256 599 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 KCNA5P22460 613 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 RPL9P32969 192 aaKnown RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 SNRPFP62306 86 aaKnown RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 AAK1Q2M2I8 961 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 USP41Q3LFD5 358 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 CRELD2Q6UXH1 353 aaPredicted RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 EMILIN2Q9BXX0 1053 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 GPR62Q9BZJ7 368 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 ASB7Q9H672 318 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
IRF3-211ENST00000596644 IRAK3Q9Y616 596 aa16.28■□□□□ 0.2
IRF3-211ENST00000596644 LINC01565O15544 149 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 TGFB1I1O43294 461 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 TRAPPC3O43617 180 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 KIF20AO95235 890 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 SMC2O95347 1197 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 EFEMP2O95967 443 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 ADRB2P07550 413 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 NFICP08651 508 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 SRGAP2BP0DMP2 458 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 CYP3A5P20815 502 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 NDUFV1P49821 464 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 UBE2HP62256 183 aa16.27■□□□□ 0.2
IRF3-211ENST00000596644 TFF2Q03403 129 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms