RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 PTPRHQ9HD43 1115 aa17.23■□□□□ 0.35
PSMC4-204ENST00000596386 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
PSMC4-204ENST00000596386 WDR87Q6ZQQ6 2873 aa17.23■□□□□ 0.35
PSMC4-204ENST00000596386 SMIM28A0A1B0GU29 152 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 KRBA1A5PL33 1030 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 XYLBO75191 536 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 POU2F2P09086 479 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 IGFBP6P24592 240 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-204ENST00000596386 OR1D2P34982 312 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 RABEP1Q15276 862 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 CD300LGQ6UXG3 332 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 C1orf186Q6ZWK4 172 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 KCNK18Q7Z418 384 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 C3orf58Q8NDZ4 430 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 SLC7A14Q8TBB6 771 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 TIPINQ9BVW5 301 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 TARS2Q9BW92 718 aaKnown RBP17.22■□□□□ 0.35
PSMC4-204ENST00000596386 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 SLC38A7Q9NVC3 462 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
PSMC4-204ENST00000596386 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
PSMC4-204ENST00000596386 GVINP1Q7Z2Y8 2422 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 CCL16O15467 120 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 MCF2P10911 925 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 PROZP22891 400 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 TKTP29401 623 aaKnown RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 OSTNP61366 133 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 NTHL1P78549 312 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 UVSSAQ2YD98 709 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 RSPO2Q6UXX9 243 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 GPR152Q8TDT2 470 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
PSMC4-204ENST00000596386 SNX27Q96L92 541 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 KMT5AQ9NQR1 393 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 CDH7Q9ULB5 785 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 CA14Q9ULX7 337 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 BACE2Q9Y5Z0 518 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 CDY1Q9Y6F8 540 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
PSMC4-204ENST00000596386 CITO14578 2027 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 ABLIM1O14639 778 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 BRCC3P46736 316 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 HYIQ5T013 277 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 MPZL3Q6UWV2 235 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 ANKS3Q6ZW76 656 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 DTWD2Q8NBA8 298 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 TBC1D17Q9HA65 648 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 SLC2A4RGQ9NR83 387 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
PSMC4-204ENST00000596386 PRR23AA6NEV1 266 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 I3L4J1 428 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 STK25O00506 426 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 SLC16A4O15374 487 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 KCNE1P15382 129 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 RFX1P22670 979 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ASCL5Q7RTU5 278 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ST13P5Q8NFI4 369 aaPredicted RBP17.19■□□□□ 0.34
PSMC4-204ENST00000596386 FGF13Q92913 245 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 FGF14Q92915 247 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 NTPCRQ9BSD7 190 aaKnown RBP17.19■□□□□ 0.34
PSMC4-204ENST00000596386 TCHPQ9BT92 498 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 ARHGEF3Q9NR81 526 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 CNTN3Q9P232 1028 aa17.19■□□□□ 0.34
PSMC4-204ENST00000596386 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 PODXLO00592 558 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 PLS3P13797 630 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 SLC8B1Q6J4K2 584 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 PHLDB3Q6NSJ2 640 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 FRMD5Q7Z6J6 570 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 TMEM161BQ8NDZ6 487 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 ITFG1Q8TB96 612 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 SPIRE2Q8WWL2 714 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 PNMA5Q96PV4 448 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 RPP25Q9BUL9 199 aaKnown RBP17.18■□□□□ 0.34
PSMC4-204ENST00000596386 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 MYH11P35749 1972 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 NOTCH4Q99466 2003 aa17.18■□□□□ 0.34
PSMC4-204ENST00000596386 VWA3AA6NCI4 1184 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 TOM1L1O75674 476 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 HARSP12081 509 aaKnown RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 ROR1Q01973 937 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms