RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 HNRNPA1P09651 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
HOMER3-208ENST00000595756 MCF2P10911 925 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 FGFR3P22607 806 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 CLCNKBP51801 687 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 UPP1Q16831 310 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 ASTLQ6HA08 431 aaPredicted RBP19.62■□□□□ 0.73
HOMER3-208ENST00000595756 CEP57Q86XR8 500 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 TMEM105Q8N8V8 129 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 SPIRE2Q8WWL2 714 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 NXPE3Q969Y0 559 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 SNX27Q96L92 541 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 MYADMQ96S97 322 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 MFSD1Q9H3U5 465 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 SLC38A7Q9NVC3 462 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.62■□□□□ 0.73
HOMER3-208ENST00000595756 MTRRQ9UBK8 725 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 KCNG1Q9UIX4 513 aa19.62■□□□□ 0.73
HOMER3-208ENST00000595756 SMIM28A0A1B0GU29 152 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 ABLIM1O14639 778 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 B3GAT3O94766 335 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 POU2F2P09086 479 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 CLCN5P51795 746 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 CWF19L1Q69YN2 538 aaKnown RBP19.61■□□□□ 0.73
HOMER3-208ENST00000595756 DCLRE1AQ6PJP8 1040 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 MPZL3Q6UWV2 235 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 ALKAL1Q6UXT8 129 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 GET4Q7L5D6 327 aaPredicted RBP19.61■□□□□ 0.73
HOMER3-208ENST00000595756 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
HOMER3-208ENST00000595756 PNMA5Q96PV4 448 aa19.61■□□□□ 0.73
HOMER3-208ENST00000595756 NTPCRQ9BSD7 190 aaKnown RBP19.61■□□□□ 0.73
HOMER3-208ENST00000595756 TARS2Q9BW92 718 aaKnown RBP19.61■□□□□ 0.73
HOMER3-208ENST00000595756 VWA3AA6NCI4 1184 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 SLC26A4O43511 780 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 TRAPPC3O43617 180 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 F13A1P00488 732 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 C8AP07357 584 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 PLS3P13797 630 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 SLC12A3P55017 1021 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 RAB33AQ14088 237 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 TMEM119Q4V9L6 283 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 C3orf58Q8NDZ4 430 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 CDK5RAP3Q96JB5 506 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 AK8Q96MA6 479 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 ZNF396Q96N95 335 aaPredicted RBP19.6■□□□□ 0.73
HOMER3-208ENST00000595756 PHOX2BQ99453 314 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 GOLGA2P5Q9HBQ8 144 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 CNTN3Q9P232 1028 aa19.6■□□□□ 0.73
HOMER3-208ENST00000595756 ZFP37Q9Y6Q3 630 aaPredicted RBP19.6■□□□□ 0.73
HOMER3-208ENST00000595756 DOCK6Q96HP0 2047 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 MYH15Q9Y2K3 1946 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 SLC16A4O15374 487 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 ADAM12O43184 909 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 KCNE1P15382 129 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 SOX4Q06945 474 aaPredicted RBP19.59■□□□□ 0.73
HOMER3-208ENST00000595756 STRN3Q13033 797 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 NOLC1Q14978 699 aaKnown RBP eCLIP19.59■□□□□ 0.73
HOMER3-208ENST00000595756 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
HOMER3-208ENST00000595756 PPM1LQ5SGD2 360 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 ATL3Q6DD88 541 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 CD300LGQ6UXG3 332 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 RTL10Q7L3V2 364 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 TMEM161BQ8NDZ6 487 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 DDX27Q96GQ7 796 aaKnown RBP19.59■□□□□ 0.73
HOMER3-208ENST00000595756 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
HOMER3-208ENST00000595756 NARSO43776 548 aaKnown RBP19.58■□□□□ 0.72
HOMER3-208ENST00000595756 XYLBO75191 536 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 TOM1L1O75674 476 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 PLA2G4BP0C869 781 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 MAPTP10636 758 aaKnown RBP19.58■□□□□ 0.72
HOMER3-208ENST00000595756 LAMP2P13473 410 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 AOC1P19801 751 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 FSHRP23945 695 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 TKTP29401 623 aaKnown RBP19.58■□□□□ 0.72
HOMER3-208ENST00000595756 SMTNP53814 917 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 OSTNP61366 133 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 SF3A1Q15459 793 aaKnown RBP19.58■□□□□ 0.72
HOMER3-208ENST00000595756 UVSSAQ2YD98 709 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 ANKS3Q6ZW76 656 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 KCNN1Q92952 543 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 ZMAT2Q96NC0 199 aaKnown RBP19.58■□□□□ 0.72
HOMER3-208ENST00000595756 ACAP3Q96P50 834 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 FBXL21Q9UKT6 434 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.72
HOMER3-208ENST00000595756 ANHXE9PGG2 379 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 H0YCG3 227 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 PODXLO00592 558 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 SRFP11831 508 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 IGFBP6P24592 240 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-208ENST00000595756 OR1D2P34982 312 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 NUCB2P80303 420 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 RAD51AP2Q09MP3 1159 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 HTR4Q13639 388 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 ZPBP2Q6X784 338 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 SIX5Q8N196 739 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 SLC7A14Q8TBB6 771 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 RSAD2Q8WXG1 361 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 TCHPQ9BT92 498 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 LARSQ9P2J5 1176 aaKnown RBP19.57■□□□□ 0.72
HOMER3-208ENST00000595756 ANKFY1Q9P2R3 1169 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 WNT16Q9UBV4 365 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms