RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 METTL7BQ6UX53 244 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 LRIG3Q6UXM1 1119 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TRIM50Q86XT4 487 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TPCN2Q8NHX9 752 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 WHAMMQ8TF30 809 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 MFSD14AQ96MC6 490 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 FBXL18Q96ME1 805 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 MMP19Q99542 508 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TMEM8AQ9HCN3 771 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 ACP6Q9NPH0 428 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 RNF14Q9UBS8 474 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TRAPPC3O43617 180 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 CYP2C8P10632 490 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 OSBPP22059 807 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 GJA5P36382 358 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 IFI16Q16666 785 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 HSDL1Q3SXM5 330 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 LMBRD2Q68DH5 695 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 FASTKD5Q7L8L6 764 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 FBXO16Q8IX29 292 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 CCHCR1Q8TD31 782 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 SEPT1Q8WYJ6 367 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 GLG1Q92896 1179 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 FGD4Q96M96 766 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 AGPAT1Q99943 283 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 OSGEPQ9NPF4 335 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 H0YCG3 227 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 K7ERI5 159 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 TGFB3P10600 412 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 GARTP22102 1010 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 ACOT2P49753 483 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 RPS6KA1Q15418 735 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 LRRC57Q8N9N7 239 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 KREMEN1Q96MU8 473 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 NIFKQ9BYG3 293 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 AZI2Q9H6S1 392 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 TMBIM4Q9HC24 238 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 RBM12Q9NTZ6 932 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 ANKFY1Q9P2R3 1169 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
SHKBP1-205ENST00000594973 SOCS7O14512 581 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 KCNK3O14649 394 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 ATP6V1G2O95670 118 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 IBSPP21815 317 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 RIPK1Q13546 671 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 FAM160B1Q5W0V3 765 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 SV2AQ7L0J3 742 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 DAAM2Q86T65 1068 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 CACNA2D3Q8IZS8 1091 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 FBXL13Q8NEE6 735 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 CTNNBL1Q8WYA6 563 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 TAF4BQ92750 862 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 SEC16BQ96JE7 1060 aa18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 ZBTB45Q96K62 511 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-205ENST00000594973 GOLGA6L10A6NI86 522 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 CYP26A1O43174 497 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 SGPL1O95470 568 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 ARL2P36404 184 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 NAMPTP43490 491 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 USP37Q86T82 979 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 SLC35G2Q8TBE7 412 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 TMC2Q8TDI7 906 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 MPHOSPH6Q99547 160 aaKnown RBP18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 PI4K2AQ9BTU6 479 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 THAP2Q9H0W7 228 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 NOD2Q9HC29 1040 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 PPANQ9NQ55 473 aaKnown RBP18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 RAB20Q9NX57 234 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 ETAA1Q9NY74 926 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 INTUQ9ULD6 942 aa18.27■□□□□ 0.51
SHKBP1-205ENST00000594973 PMM2O15305 246 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 PAEPP09466 180 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 RWDD2BP57060 319 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 NLRP11P59045 1033 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 MKRN3Q13064 507 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 TMEM63BQ5T3F8 832 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 RPUSD2Q8IZ73 545 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 TARS2Q9BW92 718 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 RPSAP08865 295 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 MFAP3P55082 362 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 ELF3P78545 371 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 PEX26Q7Z412 305 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 SLC47A2Q86VL8 602 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 EIF1ADQ8N9N8 165 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 LMBR1Q8WVP7 490 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 TCP11Q8WWU5 503 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 COPS5Q92905 334 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 ARHGEF26Q96DR7 871 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 SLC10A4Q96EP9 437 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 HAPLN2Q9GZV7 340 aa18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 AGO2Q9UKV8 859 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-205ENST00000594973 A0A0A6YYK5 440 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms