RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 ANKRD63C9JTQ0 380 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 B3GAT3O94766 335 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 PIGRP01833 764 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 CXCL8P10145 99 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 IDEP14735 1019 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 KCNE1P15382 129 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 SCP2P22307 547 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 SP100P23497 879 aaPredicted RBP16.11■□□□□ 0.17
USE1-205ENST00000594724 SPAG1Q07617 926 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 UPP1Q16831 310 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 ZBTB41Q5SVQ8 909 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 ZNF720Q7Z2F6 126 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 RNF135Q8IUD6 432 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 TMEM130Q8N3G9 435 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 UROC1Q96N76 676 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 SLC38A7Q9NVC3 462 aa16.11■□□□□ 0.17
USE1-205ENST00000594724 BDP1A6H8Y1 2624 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 TRIP11Q15643 1979 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 LOC730098B7Z3J9 87 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 TISP43B9A030 160 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 I3L4J1 428 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 GLUD1P00367 558 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 CLTAP09496 248 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 BRCC3P46736 316 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 HERC4Q5GLZ8 1057 aaPredicted RBP16.1■□□□□ 0.17
USE1-205ENST00000594724 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
USE1-205ENST00000594724 KCNG4Q8TDN1 519 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 DHX58Q96C10 678 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 MSTO1Q9BUK6 570 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 ST6GALNAC4Q9H4F1 302 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 POMKQ9H5K3 350 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 MRPL44Q9H9J2 332 aaKnown RBP16.1■□□□□ 0.17
USE1-205ENST00000594724 MAN1C1Q9NR34 630 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.1■□□□□ 0.17
USE1-205ENST00000594724 FNIP2Q9P278 1114 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 PCDHA7Q9UN72 937 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
USE1-205ENST00000594724 A0A0B4J269 797 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 TMEM189-UBE2V1I3L0A0 370 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 PODXLO00592 558 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 OGTO15294 1046 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 FAM189A1O60320 539 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 GAP43P17677 238 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 ME1P48163 572 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 KCNA1Q09470 495 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 ELAVL2Q12926 359 aaKnown RBP16.09■□□□□ 0.17
USE1-205ENST00000594724 E2F4Q16254 413 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 PSMD5Q16401 504 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
USE1-205ENST00000594724 RIPOR3Q96MK2 946 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 CLSTN3Q9BQT9 956 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 STRA6Q9BX79 667 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 SFXN1Q9H9B4 322 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 PANK4Q9NVE7 773 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 SEL1LQ9UBV2 794 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 MUTYHQ9UIF7 546 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 CFAP45Q9UL16 551 aa16.09■□□□□ 0.17
USE1-205ENST00000594724 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 FAM86C2PA6NEL3 165 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 ADAM12O43184 909 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 TGM5O43548 720 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 PPP1R37O75864 691 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 FGFR3P22607 806 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 TKTP29401 623 aaKnown RBP16.08■□□□□ 0.16
USE1-205ENST00000594724 ABCD1P33897 745 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 MTHFRP42898 656 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 CASP5P51878 434 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
USE1-205ENST00000594724 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 LILRA6Q6PI73 481 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.08■□□□□ 0.16
USE1-205ENST00000594724 GPR149Q86SP6 731 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 KIF12Q96FN5 646 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 FGFBP2Q9BYJ0 223 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 RPF1Q9H9Y2 349 aaKnown RBP16.08■□□□□ 0.16
USE1-205ENST00000594724 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 TUBGCP4Q9UGJ1 667 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 NCOR1O75376 2440 aa16.08■□□□□ 0.16
USE1-205ENST00000594724 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 POLR2DO15514 142 aaKnown RBP16.07■□□□□ 0.16
USE1-205ENST00000594724 DCXO43602 365 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 RFPL2O75678 378 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 GCNT3O95395 438 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms