RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 ARHGEF35A5YM69 484 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 FAM170BA6NMN3 283 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 LAMTOR5O43504 91 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 JAK2O60674 1132 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 KINO60870 393 aaKnown RBP20.51■□□□□ 0.87
PDE4C-205ENST00000593594 B3GAT3O94766 335 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 RPA1P27694 616 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 CLCNKBP51801 687 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 PPP2R5AQ15172 486 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 DCAF4L1Q3SXM0 396 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 GLRA4Q5JXX5 417 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 RTL10Q7L3V2 364 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 ERMNQ8TAM6 284 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 ING5Q8WYH8 240 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 PPP1R10Q96QC0 940 aaKnown RBP20.51■□□□□ 0.87
PDE4C-205ENST00000593594 FBXO4Q9UKT5 387 aa20.51■□□□□ 0.87
PDE4C-205ENST00000593594 DNAH14Q0VDD8 3507 aa20.5■□□□□ 0.87
PDE4C-205ENST00000593594 MED19A0JLT2 244 aaPredicted RBP20.5■□□□□ 0.87
PDE4C-205ENST00000593594 CD72P21854 359 aa20.5■□□□□ 0.87
PDE4C-205ENST00000593594 TKTP29401 623 aaKnown RBP20.5■□□□□ 0.87
PDE4C-205ENST00000593594 PUM1Q14671 1186 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDE4C-205ENST00000593594 DDX27Q96GQ7 796 aaKnown RBP20.5■□□□□ 0.87
PDE4C-205ENST00000593594 KIFC3Q9BVG8 833 aa20.5■□□□□ 0.87
PDE4C-205ENST00000593594 LTB4R2Q9NPC1 389 aa20.5■□□□□ 0.87
PDE4C-205ENST00000593594 MRPS23Q9Y3D9 190 aaKnown RBP20.5■□□□□ 0.87
PDE4C-205ENST00000593594 BACE2Q9Y5Z0 518 aa20.5■□□□□ 0.87
PDE4C-205ENST00000593594 EFNA5P52803 228 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 UPP1Q16831 310 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 ZBTB41Q5SVQ8 909 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 NT5DC1Q5TFE4 455 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 ATF7IP2Q5U623 682 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 ANKS3Q6ZW76 656 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 BORCS6Q96GS4 357 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 UROC1Q96N76 676 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 GOLGA2P5Q9HBQ8 144 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
PDE4C-205ENST00000593594 NCOR2Q9Y618 2525 aa20.49■□□□□ 0.87
PDE4C-205ENST00000593594 I3L4J1 428 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 SPTLC1O15269 473 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 TRAPPC3O43617 180 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 ECI2O75521 394 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 RHOP08100 348 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 MAGEA9P43362 315 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 CSTF1Q05048 431 aaKnown RBP20.48■□□□□ 0.87
PDE4C-205ENST00000593594 SLC5A9Q2M3M2 681 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 C3orf58Q8NDZ4 430 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 IFT74Q96LB3 600 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 PLA2G2FQ9BZM2 168 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 GDE1Q9NZC3 331 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 PATJQ8NI35 1801 aa20.48■□□□□ 0.87
PDE4C-205ENST00000593594 TRIP11Q15643 1979 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 SMIM28A0A1B0GU29 152 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 OR52Z1P0C646 297 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 BRCC3P46736 316 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 POTEHQ6S545 545 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 TPRG1Q6ZUI0 275 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 CLDN23Q96B33 292 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 NELL2Q99435 816 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 AVENQ9NQS1 362 aaPredicted RBP20.47■□□□□ 0.87
PDE4C-205ENST00000593594 DLL3Q9NYJ7 618 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 PCDHGA2Q9Y5H1 932 aa20.47■□□□□ 0.87
PDE4C-205ENST00000593594 MUTP22033 750 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 TARSP26639 723 aaKnown RBP20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ROR1Q01973 937 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 GUCY1B3Q02153 619 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 SOX4Q06945 474 aaPredicted RBP20.46■□□□□ 0.87
PDE4C-205ENST00000593594 SAFBQ15424 915 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ZNF174Q15697 407 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ECM1Q16610 540 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 VARS2Q5ST30 1063 aaKnown RBP20.46■□□□□ 0.87
PDE4C-205ENST00000593594 SLC8B1Q6J4K2 584 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 APBB1IPQ7Z5R6 666 aaPredicted RBP20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ZNF461Q8TAF7 563 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ATRIPQ8WXE1 791 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 KIFAP3Q92845 792 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 BHMT2Q9H2M3 363 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 TNFSF13BQ9Y275 285 aa20.46■□□□□ 0.87
PDE4C-205ENST00000593594 ARHGEF37A1IGU5 675 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 K7ERI5 159 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 LRG1P02750 347 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 CEBPBP17676 345 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 PTPN2P17706 415 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 ST3GAL1Q11201 340 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 ORC2Q13416 577 aaPredicted RBP20.45■□□□□ 0.86
PDE4C-205ENST00000593594 HAUS3Q68CZ6 603 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 TANGO2Q6ICL3 276 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 ZNF852Q6ZMS4 543 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 CEP120Q8N960 986 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 ZBTB44Q8NCP5 570 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 HEBP1Q9NRV9 189 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 NCDNQ9UBB6 729 aa20.45■□□□□ 0.86
PDE4C-205ENST00000593594 WDR27A2RRH5 827 aa20.44■□□□□ 0.86
PDE4C-205ENST00000593594 NCAM2O15394 837 aa20.44■□□□□ 0.86
PDE4C-205ENST00000593594 ABLIM3O94929 683 aa20.44■□□□□ 0.86
PDE4C-205ENST00000593594 ELF1P32519 619 aa20.44■□□□□ 0.86
PDE4C-205ENST00000593594 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms