RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 SRRTQ9BXP5 876 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 TMEM117Q9H0C3 514 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 CWH43Q9H720 699 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 MIOSQ9NXC5 875 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 CPSF3Q9UKF6 684 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 PCDHGC5Q9Y5F6 944 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 ANK1P16157 1881 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 F8W810 466 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 PTGESO14684 152 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 OGTO15294 1046 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 HOXA2O43364 376 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 EXTL3O43909 919 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 EOMESO95936 686 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 GARTP22102 1010 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 ERCC5P28715 1186 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-220ENST00000593008 AXLP30530 894 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 GRM5P41594 1212 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 MYL5Q02045 173 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 ADAM9Q13443 819 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 CAMK1Q14012 370 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 SNRNP35Q16560 246 aaKnown RBP10.48□□□□□ -0.73
DDX39A-220ENST00000593008 EDRF1Q3B7T1 1238 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 SLC10A6Q3KNW5 377 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 DCAF4L1Q3SXM0 396 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 BRSK2Q8IWQ3 736 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 C12orf56Q8IXR9 622 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 XXYLT1Q8NBI6 393 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 SPPL3Q8TCT6 385 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 RABGGTAQ92696 567 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 C18orf25Q96B23 403 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-220ENST00000593008 CCDC127Q96BQ5 260 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 SNX27Q96L92 541 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 GAD1Q99259 594 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 TRAIPQ9BWF2 469 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 TRIM6Q9C030 488 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-220ENST00000593008 MMRN2Q9H8L6 949 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.733e-6■■■■■ 28.8
DDX39A-220ENST00000593008 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 RBAKQ9NYW8 714 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-220ENST00000593008 TUBGCP4Q9UGJ1 667 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 PARP2Q9UGN5 583 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 DACH1Q9UI36 760 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 PCDHB12Q9Y5F1 795 aa10.48□□□□□ -0.73
DDX39A-220ENST00000593008 RALGAPA2Q2PPJ7 1873 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 LRRIQ3A6PVS8 624 aaPredicted RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 LACTBL1A8MY62 500 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 PPEF2O14830 753 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 AP5Z1O43299 807 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 LRRN2O75325 713 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 FGF18O76093 207 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 KIF20AO95235 890 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 SKIP12755 728 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 ITGA4P13612 1032 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 LAG3P18627 525 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 IRS1P35568 1242 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 RAB27AP51159 221 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 SCNN1GP51170 649 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 KCNQ1P51787 676 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 MRPS5P82675 430 aaKnown RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 CYP24A1Q07973 514 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 TIGD5Q53EQ6 642 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 CDKAL1Q5VV42 579 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 GLB1LQ6UWU2 654 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 MRPL10Q7Z7H8 261 aaKnown RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 CREBRFQ8IUR6 639 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 FAM186BQ8IYM0 893 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 GOLGA5Q8TBA6 731 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 ENOX1Q8TC92 643 aaKnown RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 POF1BQ8WVV4 589 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 HLA-CQ95604 372 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 FBXL18Q96ME1 805 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 ASB2Q96Q27 587 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 ADPGKQ9BRR6 497 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 NSUN3Q9H649 340 aaKnown RBP10.47□□□□□ -0.73
DDX39A-220ENST00000593008 IGFLR1Q9H665 355 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 TAB2Q9NYJ8 693 aa10.47□□□□□ -0.73
DDX39A-220ENST00000593008 BICDL2A1A5D9 508 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ARL5CA6NH57 179 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 KCNJ18B7U540 433 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 NT5C1B-RDH14C9J2C7 533 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 CETN3O15182 167 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF623O75123 536 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms