RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 VPS52Q8N1B4 723 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
H3F3B-212ENST00000592643 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 RPS6KC1Q96S38 1066 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
H3F3B-212ENST00000592643 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
H3F3B-212ENST00000592643 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 C2orf71A6NGG8 1288 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PPEF2O14830 753 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 MYL1P05976 194 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 NFICP08651 508 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 CTSAP10619 480 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 GARTP22102 1010 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-212ENST00000592643 POSTNQ15063 836 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 TIGD5Q53EQ6 642 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PLPP4Q5VZY2 271 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-212ENST00000592643 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 HASPINQ8TF76 798 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 POMGNT1Q8WZA1 660 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 FAM193BQ96PV7 902 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-212ENST00000592643 KCTD10Q9H3F6 313 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 TMEM206Q9H813 350 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 AGPAT3Q9NRZ7 376 aa12.91□□□□□ -0.34
H3F3B-212ENST00000592643 TOPORSQ9NS56 1045 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-212ENST00000592643 PTPRJQ12913 1337 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 TBX10O75333 385 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
H3F3B-212ENST00000592643 NRIP1P48552 1158 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 YARSP54577 528 aaKnown RBP12.9□□□□□ -0.34
H3F3B-212ENST00000592643 KRT17Q04695 432 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 KCNB1Q14721 858 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 SLFN12LQ6IEE8 588 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 FUT10Q6P4F1 479 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
H3F3B-212ENST00000592643 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 CXorf38Q8TB03 319 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 TIGD1Q96MW7 591 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 HERC2P3Q9BVR0 1158 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
H3F3B-212ENST00000592643 TMEM189-UBE2V1I3L0A0 370 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 I3L4J1 428 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 CLIC2O15247 247 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 PRPF40AO75400 957 aaKnown RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 SOD2P04179 222 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 BMP6P22004 513 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 BRCC3P46736 316 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 ADAM15Q13444 863 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 DUSP6Q16828 381 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 DMAC2Q9NW81 257 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 HSPBP1Q9NZL4 362 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
H3F3B-212ENST00000592643 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
H3F3B-212ENST00000592643 UBE4BO95155 1302 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 GOLGA6L4A6NEF3 574 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 PODXLO00592 558 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 SPTLC1O15269 473 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 EXTL3O43909 919 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 CLASP2O75122 1294 aaKnown RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 CXCL14O95715 111 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 LRPAP1P30533 357 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 UBE2HP62256 183 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 DSG1Q02413 1049 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 PSMD2Q13200 908 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 KYAT1Q16773 422 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
H3F3B-212ENST00000592643 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
H3F3B-212ENST00000592643 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms