RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 MTRRQ9UBK8 725 aa21.67■■□□□ 1.06
PRKCSH-216ENST00000592445 NDRG2Q9UN36 371 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-216ENST00000592445 FAM205CA6NFA0 338 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 B3GAT3O94766 335 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 LIG1P18858 919 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 NRLP54845 237 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 PPP2R5DQ14738 602 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 NAB2Q15742 525 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 CALCRLQ16602 461 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 FAM187BQ17R55 369 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 CDCA2Q69YH5 1023 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 TANGO2Q6ICL3 276 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 ELSPBP1Q96BH3 223 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 TTC12Q9H892 705 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 GDAQ9Y2T3 454 aa21.66■■□□□ 1.06
PRKCSH-216ENST00000592445 TTLL13PA6NNM8 815 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 MAN2B1O00754 1011 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 CEBPBP17676 345 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 PTPN2P17706 415 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 ATP2B1P20020 1258 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 TGM1P22735 817 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 SPEM2Q0P670 501 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 FZD5Q13467 585 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 LPAL2Q16609 132 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 MAPK6Q16659 721 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 MCPH1Q8NEM0 835 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 DNASE1L2Q92874 299 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 C2orf40Q9H1Z8 148 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 BRD9Q9H8M2 597 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 PARD6AQ9NPB6 346 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 BACE2Q9Y5Z0 518 aa21.65■■□□□ 1.06
PRKCSH-216ENST00000592445 STK36Q9NRP7 1315 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 PRRG1O14668 218 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 TRAPPC3O43617 180 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 LRG1P02750 347 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 XRCC6P12956 609 aaKnown RBP eCLIP21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 ELF1P32519 619 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 TXKP42681 527 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 SCRN1Q12765 414 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 GRM2Q14416 872 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 ANKS3Q6ZW76 656 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 AVENQ9NQS1 362 aaPredicted RBP21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 PDRG1Q9NUG6 133 aa21.64■■□□□ 1.05
PRKCSH-216ENST00000592445 NOTCH4Q99466 2003 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 TMEM189-UBE2V1I3L0A0 370 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 DTNBO60941 627 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 PRKCBP05771 671 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 IGFBP6P24592 240 aaPredicted RBP21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 TKTP29401 623 aaKnown RBP21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 KRT2P35908 639 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 CLCNKBP51801 687 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 NR5A1Q13285 461 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 GLRA4Q5JXX5 417 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 CORO1BQ9BR76 489 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 TRMT61BQ9BVS5 477 aaKnown RBP21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 CHRDQ9H2X0 955 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 ZFP14Q9HCL3 533 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 BRMS1Q9HCU9 246 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 USP20Q9Y2K6 914 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 VWA8A3KMH1 1905 aa21.63■■□□□ 1.05
PRKCSH-216ENST00000592445 SHISA7A6NL88 538 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 I3L4J1 428 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 RBM25P49756 843 aaKnown RBP21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 ST3GAL2Q16842 350 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 LAIR1Q6GTX8 287 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 PRR23BQ6ZRT6 265 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 CELF5Q8N6W0 485 aaKnown RBP21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 ZNF461Q8TAF7 563 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 DEPTORQ8TB45 409 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 IRF7Q92985 503 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 DDX27Q96GQ7 796 aaKnown RBP21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 UROC1Q96N76 676 aa21.62■■□□□ 1.05
PRKCSH-216ENST00000592445 ACKR2O00590 384 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 NEMFO60524 1076 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 ADRB1P08588 477 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 ARPP19P56211 112 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 UPP1Q16831 310 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 DCAF4L1Q3SXM0 396 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 FAM78AQ5JUQ0 283 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 POTEHQ6S545 545 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 FAM3CQ92520 227 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 WASF1Q92558 559 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 IER2Q9BTL4 223 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 TM6SF1Q9BZW5 370 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 LMAN1LQ9HAT1 526 aa21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 ORC3Q9UBD5 711 aaPredicted RBP21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.61■■□□□ 1.05
PRKCSH-216ENST00000592445 ARHGEF37A1IGU5 675 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 ZNF197O14709 1029 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 TDGF1P13385 188 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 FCARP24071 287 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 CCR3P51677 355 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 ROR1Q01973 937 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 PPM1JQ5JR12 505 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 EEF1DP3Q658K8 133 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 PDZD4Q76G19 769 aaPredicted RBP21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 NETO1Q8TDF5 533 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 BSNDQ8WZ55 320 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 TCEAL4Q96EI5 215 aa21.6■■□□□ 1.05
PRKCSH-216ENST00000592445 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms