RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 TBC1D13Q9NVG8 400 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 PLAGL2Q9UPG8 496 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 PCDHA11Q9Y5I1 949 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 SMTNL1A8MU46 457 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 TLL1O43897 1013 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 POMCP01189 267 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 KRT13P13646 458 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 CYP3A5P20815 502 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 VAMP7P51809 220 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 DSC1Q08554 894 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
APOC1-206ENST00000590334 C1orf220Q5T0J3 134 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 JADE1Q6IE81 842 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 USP37Q86T82 979 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 FAM114A1Q8IWE2 563 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 TRIM59Q8IWR1 403 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 LRRC43Q8N309 656 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 CGRRF1Q99675 332 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 CWH43Q9H720 699 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 CBX8Q9HC52 389 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
APOC1-206ENST00000590334 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
APOC1-206ENST00000590334 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 DDHD2O94830 711 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 NFICP08651 508 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 LINC00271P0C7V0 271 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 ZNF18P17022 549 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 AP3M2P53677 418 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 DLG4P78352 724 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 TUSC3Q13454 348 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 BTG3Q14201 252 aaPredicted RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 COLGALT2Q8IYK4 626 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 CACTINQ8WUQ7 758 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 ZNF516Q92618 1163 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 NRDE2Q9H7Z3 1164 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 SAMSN1Q9NSI8 373 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 FANCLQ9NW38 375 aa13.06□□□□□ -0.32
APOC1-206ENST00000590334 UBQLN1Q9UMX0 589 aaKnown RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
APOC1-206ENST00000590334 SCN1AP35498 2009 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 TSC2P49815 1807 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 B4GALT3O60512 393 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 EEF1GP26641 437 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 LRPAP1P30533 357 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 GTF2H1P32780 548 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 RABGGTBP53611 331 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 SMAD3P84022 425 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 SPAG1Q07617 926 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 DUOXA2Q1HG44 320 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 TCP11X2Q5H9J9 407 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 FIBCD1Q8N539 461 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 OR5B17Q8NGF7 314 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 CCDC127Q96BQ5 260 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 UROC1Q96N76 676 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 POP1Q99575 1024 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 TMEM175Q9BSA9 504 aa13.05□□□□□ -0.32
APOC1-206ENST00000590334 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
APOC1-206ENST00000590334 LAMA3Q16787 3333 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 LINC01553A4QN01 128 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 KCNJ18B7U540 433 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 PMM2O15305 246 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 STX10O60499 249 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 C4BPAP04003 597 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms