RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-204ENST00000589118 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ECI2O75521 394 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 DGAT1O75907 488 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ADRB1P08588 477 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 GJA1P17302 382 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 FGFR3P22607 806 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 PSMA5P28066 241 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 CCR2P41597 374 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 RPS9P46781 194 aaKnown RBP16.68■□□□□ 0.26
SF3A2-204ENST00000589118 CLCNKBP51801 687 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ARPP19P56211 112 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 NR5A1Q13285 461 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 PPM1JQ5JR12 505 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 FAM78AQ5JUQ0 283 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 GALNT17Q6IS24 598 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 PRR23BQ6ZRT6 265 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 GPIHBP1Q8IV16 184 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 GPR161Q8N6U8 529 aaKnown RBP16.68■□□□□ 0.26
SF3A2-204ENST00000589118 C3orf58Q8NDZ4 430 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ZSWIM3Q96MP5 696 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 NELL2Q99435 816 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 CORO1BQ9BR76 489 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 LMAN1LQ9HAT1 526 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 ANKEF1Q9NU02 776 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 MTRRQ9UBK8 725 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 GMEB2Q9UKD1 530 aa16.68■□□□□ 0.26
SF3A2-204ENST00000589118 PDCD11Q14690 1871 aaKnown RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 NCAM2O15394 837 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 SEC24AO95486 1093 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 TXKP42681 527 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 SATB1Q01826 763 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 SCRN1Q12765 414 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 GAS6Q14393 721 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 TMEM132AQ24JP5 1023 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 CENPQQ7L2Z9 268 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 HS6ST3Q8IZP7 471 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 DDX27Q96GQ7 796 aaKnown RBP16.67■□□□□ 0.26
SF3A2-204ENST00000589118 CHAMP1Q96JM3 812 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 NFKBIZQ9BYH8 718 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 FZD8Q9H461 694 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 KCNH3Q9ULD8 1083 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 PCDHA12Q9UN75 941 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 NCANO14594 1321 aa16.67■□□□□ 0.26
SF3A2-204ENST00000589118 HRO43593 1189 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 B3GAT3O94766 335 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 PTPN2P17706 415 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 SDHBP21912 280 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 VIPR2P41587 438 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 MAGEA9P43362 315 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 SOX4Q06945 474 aaPredicted RBP16.66■□□□□ 0.26
SF3A2-204ENST00000589118 UVSSAQ2YD98 709 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 TMEM130Q8N3G9 435 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 CCDC43Q96MW1 224 aaKnown RBP16.66■□□□□ 0.26
SF3A2-204ENST00000589118 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
SF3A2-204ENST00000589118 BRD9Q9H8M2 597 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 C2orf42Q9NWW7 574 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
SF3A2-204ENST00000589118 F5P12259 2224 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 WDR27A2RRH5 827 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 CHURC1-FNTBB4DL54 471 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 LYPLA2O95372 231 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 GDI1P31150 447 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 FNTBP49356 437 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 FOSBP53539 338 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 ROR1Q01973 937 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 PRPF4BQ13523 1007 aaKnown RBP16.65■□□□□ 0.26
SF3A2-204ENST00000589118 PRSS36Q5K4E3 855 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 VITQ6UXI7 678 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 ELSPBP1Q96BH3 223 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 CHRDQ9H2X0 955 aa16.65■□□□□ 0.26
SF3A2-204ENST00000589118 RBM12Q9NTZ6 932 aaKnown RBP16.65■□□□□ 0.26
SF3A2-204ENST00000589118 PRMT7Q9NVM4 692 aaPredicted RBP16.65■□□□□ 0.26
SF3A2-204ENST00000589118 N4BP3O15049 544 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 CTDNEP1O95476 244 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 PRKCBP05771 671 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 ATP2B1P20020 1258 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 SOX9P48436 509 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
SF3A2-204ENST00000589118 WDR44Q5JSH3 913 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 HEATR6Q6AI08 1181 aaKnown RBP16.64■□□□□ 0.25
SF3A2-204ENST00000589118 CEP120Q8N960 986 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 TTC8Q8TAM2 541 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 FAM3CQ92520 227 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 PPP1R10Q96QC0 940 aaKnown RBP16.64■□□□□ 0.25
SF3A2-204ENST00000589118 TRMT61BQ9BVS5 477 aaKnown RBP16.64■□□□□ 0.25
SF3A2-204ENST00000589118 CYP4F11Q9HBI6 524 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 ZNF334Q9HCZ1 680 aaPredicted RBP16.64■□□□□ 0.25
SF3A2-204ENST00000589118 SEMA4GQ9NTN9 838 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 GDE1Q9NZC3 331 aa16.64■□□□□ 0.25
SF3A2-204ENST00000589118 MRPS17Q9Y2R5 130 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms